RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 ACOX3O15254 700 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 HS6ST1O60243 411 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 SLC19A2O60779 497 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 TBX19O60806 448 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 PEX11AO75192 247 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 SLITRK5O94991 958 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 JUNP05412 331 aaKnown RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 CCL3P10147 92 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 BCKDHAP12694 445 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 PCSK2P16519 638 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 SDC1P18827 310 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 MAPK1P28482 360 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 PTGER1P34995 402 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 PIGAP37287 484 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 ASMTP46597 345 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 SLC1A6P48664 564 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 TMED10P49755 219 aaKnown RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 RPL38P63173 70 aaKnown RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 MRPS35P82673 323 aaKnown RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 PLGLB1Q02325 96 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 DUSP8Q13202 625 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 STX3Q13277 289 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 CASP8Q14790 479 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 HYAL4Q2M3T9 481 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 ATP6AP1LQ52LC2 224 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 XKR7Q5GH72 579 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 TBCELQ5QJ74 424 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 C6orf136Q5SQH8 315 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 HHATQ5VTY9 493 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 CES4AQ5XG92 561 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 TMEM64Q6YI46 380 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 NUP54Q7Z3B4 507 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 SLC22A16Q86VW1 577 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 FAM9CQ8IZT9 166 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 KIRREL3Q8IZU9 778 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 FAM13CQ8NE31 585 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 OR52N2Q8NGI0 321 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 OR9A2Q8NGT5 310 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 KAT2AQ92830 837 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 MTERF3Q96E29 417 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 ZNF764Q96H86 408 aaPredicted RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 C3orf30Q96M34 536 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 PAIP2Q9BPZ3 127 aaKnown RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 C20orf27Q9GZN8 174 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 NXF5Q9H1B4 397 aaKnown RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 TSPAN10Q9H1Z9 355 aaPredicted RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 GLIPR2Q9H4G4 154 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 REEP4Q9H6H4 257 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 IL1RL2Q9HB29 575 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 TAS2R9Q9NYW1 312 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 DTX4Q9Y2E6 619 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 GPR55Q9Y2T6 319 aaPredicted RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 RAP2CQ9Y3L5 183 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 CHCHD2Q9Y6H1 151 aaPredicted RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.07□□□□□ -0.96
CD48-202ENST00000368046 SHANK1Q9Y566 2161 aa9.07□□□□□ -0.96
CD48-202ENST00000368046 TRGV8A0A0C4DH27 118 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ATP6AP2A0A1C7CYW4 349 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 TMEM120BA0PK00 339 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 G3V3Y1 287 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ACOT7O00154 380 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 TO15178 435 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 LYPLA1O75608 230 aaPredicted RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 PPM1BO75688 479 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ATP6AP2O75787 350 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 GLSO94925 669 aaPredicted RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 SNX4O95219 450 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 LDLRP01130 860 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ABCB1P08183 1280 aaPredicted RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 PRPS2P11908 318 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 BGNP21810 368 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ABCD3P28288 659 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 RFC3P40938 356 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 CASP3P42574 277 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 DNASE1L1P49184 302 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 RPL14P50914 215 aaKnown RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 NCBP2P52298 156 aaKnown RBP eCLIP9.06□□□□□ -0.96
CD48-202ENST00000368046 CASP6P55212 293 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 PER3P56645 1201 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 MAGOHP61326 146 aaKnown RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 PSPHP78330 225 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 RPP38P78345 283 aaKnown RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 FOXO1Q12778 655 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 SLC10A1Q14973 349 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 SMU1Q2TAY7 513 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 CMPK2Q5EBM0 449 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 TMEM198Q66K66 360 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 Q6ZPB1 254 aaPredicted RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 R3HCC1LQ7Z5L2 792 aaKnown RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 FBXW8Q8N3Y1 598 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ZNF781Q8N8C0 355 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 ANKRD42Q8N9B4 389 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 OR7G2Q8NG99 324 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 OR10G3Q8NGC4 313 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 OR5M3Q8NGP4 307 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 SPPL2AQ8TCT8 520 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 DIO2Q92813 273 aa9.06□□□□□ -0.96
CD48-202ENST00000368046 GFM2Q969S9 779 aaKnown RBP9.06□□□□□ -0.96
CD48-202ENST00000368046 PPCDCQ96CD2 204 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms