RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 TUBA1BP68363 451 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 ALG11Q2TAA5 492 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 GPAT3Q53EU6 434 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 PTCHD4Q6ZW05 846 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 FAM20CQ8IXL6 584 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 OR5D16Q8NGK9 328 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 GPBAR1Q8TDU6 330 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 SLC38A4Q969I6 547 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 ZFYVE21Q9BQ24 234 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
USF1-202ENST00000368020 KLHL28Q9NXS3 571 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 ZNF226Q9NYT6 803 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 ACTR10Q9NZ32 417 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 PTGFRNQ9P2B2 879 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 GON4LQ3T8J9 2241 aa13.18□□□□□ -0.3
USF1-202ENST00000368020 H0Y8X5 98 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 K7ESF4 209 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 CNOT3O75175 753 aaKnown RBP13.17□□□□□ -0.3
USF1-202ENST00000368020 NME6O75414 186 aaPredicted RBP13.17□□□□□ -0.3
USF1-202ENST00000368020 ALPPP05187 535 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 INHBBP09529 407 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 SMIM10L1P0DMW3 83 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 HOXB3P14651 431 aaPredicted RBP13.17□□□□□ -0.3
USF1-202ENST00000368020 CPN2P22792 545 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 C21orf59P57076 290 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.17□□□□□ -0.3
USF1-202ENST00000368020 GPR19Q15760 415 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 MEDAGQ5VYS4 303 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 SLX4IPQ5VYV7 408 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 C18orf63Q68DL7 685 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 FIGLAQ6QHK4 219 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 TMEM107Q6UX40 140 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 CASP12Q6UXS9 341 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 Q6ZSR6 202 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 ZNF367Q7RTV3 350 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 C16orf62Q7Z3J2 963 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 BMP8AQ7Z5Y6 402 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 CCDC103Q8IW40 242 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 AVL9Q8NBF6 648 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 TOR1AIP2Q8NFQ8 470 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 OR4K14Q8NGD5 310 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 VANGL1Q8TAA9 524 aaPredicted RBP13.17□□□□□ -0.3
USF1-202ENST00000368020 FLVCR1-AS1Q8TAF5 88 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 GGHQ92820 318 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 VMP1Q96GC9 406 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 SMIM10Q96HG1 83 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 OR7D2Q96RA2 312 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 FUZQ9BT04 418 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 CDCA4Q9BXL8 241 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 POLR2J3Q9H1A7 115 aaKnown RBP13.17□□□□□ -0.3
USF1-202ENST00000368020 HMG20AQ9NP66 347 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 GIN1Q9NXP7 522 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 WSB2Q9NYS7 404 aaPredicted RBP13.17□□□□□ -0.3
USF1-202ENST00000368020 B3GNT3Q9Y2A9 372 aa13.17□□□□□ -0.3
USF1-202ENST00000368020 GOLGA4Q13439 2230 aaKnown RBP13.17□□□□□ -0.3
USF1-202ENST00000368020 SOX30O94993 753 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 EML2O95834 649 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 CHRM4P08173 479 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 POU2F1P14859 743 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 CD36P16671 472 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 ZNF12P17014 697 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 MAGP20916 626 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PRKAR1BP31321 381 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 FEN1P39748 380 aaKnown RBP13.16□□□□□ -0.3
USF1-202ENST00000368020 MC3RP41968 323 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 GSSP48637 474 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 BLKP51451 505 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 XKP51811 444 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 GPR18Q14330 331 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 SPCS2Q15005 226 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 TIMM50Q3ZCQ8 353 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 TMEM201Q5SNT2 666 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 OR8J1Q8NGP2 316 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 FNDC8Q8TC99 324 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 UCN3Q969E3 161 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 UBE2FQ969M7 185 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 MACROD1Q9BQ69 325 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PRRG3Q9BZD7 231 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 RHCGQ9UBD6 479 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 REV1Q9UBZ9 1251 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 A4GNTQ9UNA3 340 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 IFT52Q9Y366 437 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 ARHGEF17Q96PE2 2063 aaPredicted RBP13.16□□□□□ -0.3
USF1-202ENST00000368020 PRAMEF27A3QJZ7 478 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 TLR4O00206 839 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 SCAMP1O15126 338 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PRKRAO75569 313 aaKnown RBP13.16□□□□□ -0.3
USF1-202ENST00000368020 CNR2P34972 360 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 MAN2A2P49641 1150 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 AQP6Q13520 282 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 ZNF846Q147U1 533 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 FAM214AQ32MH5 1076 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 KIAA0895LQ68EN5 471 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 CDC73Q6P1J9 531 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 FBXO42Q6P3S6 717 aa13.16□□□□□ -0.3
USF1-202ENST00000368020 PGBD2Q6P3X8 592 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms