RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 TCTE1Q5JU00 501 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PGBD2Q6P3X8 592 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SMARCD3Q6STE5 483 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SMIM5Q71RC9 77 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 GPRIN1Q7Z2K8 1008 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 AMIGO1Q86WK6 493 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 GPSM1Q86YR5 675 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SULF1Q8IWU6 871 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PIP4P2Q8N4L2 257 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CCDC24Q8N4L8 307 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 COMMD1Q8N668 190 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 C11orf65Q8NCR3 313 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR56A3Q8NH54 315 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OR10A6Q8NH74 314 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 UBA3Q8TBC4 463 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SOCS4Q8WXH5 440 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 OSTF1Q92882 214 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 TM4SF18Q96CE8 201 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 MTFMTQ96DP5 389 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 LMLNQ96KR4 655 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 TBATAQ96M53 351 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ZNF582Q96NG8 517 aaPredicted RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 PARK7Q99497 189 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 KCNS3Q9BQ31 491 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 BTBD1Q9H0C5 482 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ARV1Q9H2C2 271 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SARS2Q9NP81 518 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 ACKR4Q9NPB9 350 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SLC22A11Q9NSA0 550 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 EXO1Q9UQ84 846 aaKnown RBP4.26□□□□□ -1.73
PTPN22-201ENST00000359785 SSUH2Q9Y2M2 353 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 CHST2Q9Y4C5 530 aa4.26□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3DA0A087WVF3 549 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3IA0A087WXS9 549 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3EA0A087X179 549 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3KA0A087X1G2 549 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 A0A0D9SG52 128 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 A0A1B0GWJ7 208 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 A0A1W2PQL4 384 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3FA6NER0 549 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3LB9A6J9 549 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 M0QYT0 321 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 FFAR2O15552 330 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 ADAM12O43184 909 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 EIF1BO60739 113 aaKnown RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 MMP20O60882 483 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 CLN5O75503 358 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 PCDH8O95206 1070 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 GUCA1CO95843 209 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 GBAP04062 536 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 HRGP04196 525 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 UCHL1P09936 223 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 LINC00032P0C843 101 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 RCC1P18754 421 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 IDSP22304 550 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 FPR3P25089 353 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 C21orf33P30042 268 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 SDHAP31040 664 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 CCR1P32246 355 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 NUP62P37198 522 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 EIF1P41567 113 aaKnown RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 MAP2K6P52564 334 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 NKX2-5P52952 324 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 ATXN1P54253 815 aaKnown RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 LILRA4P59901 499 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 POU6F2P78424 691 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 POU4F2Q12837 409 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 C1DQ13901 141 aaKnown RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 UBE2NLQ5JXB2 153 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 DMKNQ6E0U4 476 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3CQ6IPX1 549 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 FIGNL1Q6PIW4 674 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 SLC36A4Q6YBV0 504 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 AHSA2Q719I0 299 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TBC1D3Q8IZP1 549 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 KCNRGQ8N5I3 272 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 C15orf54Q8N8G6 183 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 ARL14EPQ8N8R7 260 aaPredicted RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 GPR26Q8NDV2 337 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 NLGN2Q8NFZ4 835 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 OR4D10Q8NGI6 311 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 EGFL8Q99944 293 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 RHNO1Q9BSD3 238 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 WACQ9BTA9 647 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 DPH7Q9BTV6 452 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TTPALQ9BTX7 342 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 TMED9Q9BVK6 235 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 PRRG3Q9BZD7 231 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 SLC7A5P2Q9GIP4 190 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 MRPS30Q9NP92 439 aaKnown RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 FARSBQ9NSD9 589 aaKnown RBP4.25□□□□□ -1.73
PTPN22-201ENST00000359785 EXD2Q9NVH0 621 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 MS4A12Q9NXJ0 267 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 FLRT1Q9NZU1 646 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 COPS3Q9UNS2 423 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 BAIAP2Q9UQB8 552 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 ATG4BQ9Y4P1 393 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 DMRT1Q9Y5R6 373 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 HS3ST4Q9Y661 456 aa4.25□□□□□ -1.73
PTPN22-201ENST00000359785 MDC1Q14676 2089 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms