RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 GXYLT2A0PJZ3 443 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 HMX3A6NHT5 357 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 HEPACAM2A8MVW5 462 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 MAP4K2Q12851 820 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 EEF1A1P5Q5VTE0 462 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 CLECL1Q8IZS7 167 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 POC1BQ8TC44 478 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 CHPT1Q8WUD6 406 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 PFDN5Q99471 154 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 PAPOLGQ9BWT3 736 aaKnown RBP17.5■□□□□ 0.39
SHANK1-202ENST00000359082 AIG1Q9NVV5 245 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 FTCDNL1E5RQL4 147 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 STT3AP46977 705 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 NTRK2Q16620 822 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 ASCC1Q8N9N2 400 aaKnown RBP17.5■□□□□ 0.39
SHANK1-202ENST00000359082 OR5H2Q8NGV7 314 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 LATO43561 262 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 PPP1R3DO95685 299 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 NPRL3Q12980 569 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 TMEM173Q86WV6 379 aaPredicted RBP17.5■□□□□ 0.39
SHANK1-202ENST00000359082 CWH43Q9H720 699 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 MARCH4Q9P2E8 410 aaPredicted RBP17.5■□□□□ 0.39
SHANK1-202ENST00000359082 TAS2R38P59533 333 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 APCDD1Q8J025 514 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 SCML4Q8N228 414 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 IQCF1Q8N6M8 205 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 SLC41A3Q96GZ6 507 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 GABRQQ9UN88 632 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 C6P13671 934 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 GPR139Q6DWJ6 353 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 PXKQ7Z7A4 578 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 IGFN1Q86VF2 1251 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 OR51T1Q8NGJ9 327 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 OR14L1PQ8NHC6 308 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 RHBDF1Q96CC6 855 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 SFXN1Q9H9B4 322 aa17.5■□□□□ 0.39
SHANK1-202ENST00000359082 TYROBPO43914 113 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 ETFAP13804 333 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 AKR1C2P52895 323 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 KIAA0319Q5VV43 1072 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 OR52E8Q6IFG1 317 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 CRTC1Q6UUV9 634 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 LILRB2Q8N423 598 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 OR5AK2Q8NH90 309 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 MAL2Q969L2 176 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 OR4K3Q96R72 315 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 DZANK1Q9NVP4 752 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 K7ERQ8 282 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 HTR3BO95264 441 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 TNFRSF1BP20333 461 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 PITPNBP48739 271 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 PON2Q15165 354 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 SGCZQ96LD1 299 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 RANBP9Q96S59 729 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 MGLLQ99685 303 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 CDC6Q99741 560 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 POTEKPQ9BYX7 375 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 DUOX1Q9NRD9 1551 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 CREBL2O60519 120 aaPredicted RBP17.49■□□□□ 0.39
SHANK1-202ENST00000359082 PPIL3Q9H2H8 161 aaKnown RBP17.49■□□□□ 0.39
SHANK1-202ENST00000359082 PAQR5Q9NXK6 330 aaPredicted RBP17.49■□□□□ 0.39
SHANK1-202ENST00000359082 FAM171A2A8MVW0 826 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 PTH2RP49190 550 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 FXYD4P59646 89 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 PSPHP78330 225 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 SPHARQ15513 63 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 RHEBL1Q8TAI7 183 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 C16orf78Q8WTQ4 265 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 KLHL9Q9P2J3 617 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 KNDC1Q76NI1 1749 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 PHYHO14832 338 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 MPPED1O15442 326 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 AMY2AP04746 511 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 SOX3P41225 446 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 SIM1P81133 766 aaPredicted RBP17.49■□□□□ 0.39
SHANK1-202ENST00000359082 FTMTQ8N4E7 242 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 ASB15Q8WXK1 588 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 METTL2AQ96IZ6 378 aaKnown RBP17.49■□□□□ 0.39
SHANK1-202ENST00000359082 SLC2A13Q96QE2 648 aa17.49■□□□□ 0.39
SHANK1-202ENST00000359082 F2P00734 622 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 ALDOAP04075 364 aaKnown RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 UEVLDQ8IX04 471 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 SLC10A2Q12908 348 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 NPRL2Q8WTW4 380 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 ACTR6Q9GZN1 396 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 MAGIXQ9H6Y5 334 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 EPOP01588 193 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 DRD2P14416 443 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 POLR2HP52434 150 aaKnown RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 PITX1P78337 314 aaPredicted RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 EIF2B1Q14232 305 aaKnown RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 DEFB110Q30KQ9 67 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 SLC35F2Q8IXU6 374 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 SYNPO2LQ9H987 977 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 NAALAD2Q9Y3Q0 740 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 LTN1O94822 1766 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 TMEM225BP0DP42 221 aa17.48■□□□□ 0.39
SHANK1-202ENST00000359082 ENDOUP21128 410 aaKnown RBP17.48■□□□□ 0.39
SHANK1-202ENST00000359082 KDELR2P33947 212 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms