RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SMG7Q92540 1137 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 LRR1Q96L50 414 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 HHIPQ96QV1 700 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 NLNQ9BYT8 704 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 GSX2Q9BZM3 304 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 TMEM245Q9H330 911 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 MTG2Q9H4K7 406 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 C1GALT1Q9NS00 363 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 TXNL4BQ9NX01 149 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 CNOT2Q9NZN8 540 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 TP53BP1Q12888 1972 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 PIPSLA2A3N6 862 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC35F4A4IF30 521 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 ZNF670-ZNF695F2Z2N8 137 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 FFAR1O14842 300 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 PROM1O43490 865 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 NME6O75414 186 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 ZNF821O75541 412 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 NCR1O76036 304 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 IGHA2P01877 340 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 URODP06132 367 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 GLAP06280 429 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC2A2P11168 524 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 IMPA1P29218 277 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 MAN2A2P49641 1150 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 GDI2P50395 445 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 ACLYP53396 1101 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 PRKAG1P54619 331 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 MANFP55145 182 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 ABATP80404 500 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 PUM1Q14671 1186 aaKnown RBP eCLIP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 NCF4Q15080 339 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 WSCD2Q2TBF2 565 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 DEFB115Q30KQ5 88 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 Q3ZCU0 254 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 CLEC12AQ5QGZ9 265 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 ZNF57Q68EA5 555 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 GRHL2Q6ISB3 625 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 CCDC149Q6ZUS6 474 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 RRM2BQ7LG56 351 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 PDZD3Q86UT5 571 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 LAPTM4BQ86VI4 370 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 CBARPQ8N350 705 aaPredicted RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 C1QTNF6Q9BXI9 259 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC6A16Q9GZN6 736 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 TBC1D17Q9HA65 648 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 COPZ2Q9P299 210 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 GULP1Q9UBP9 304 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 FTSJ1Q9UET6 329 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 SRRDQ9UH36 339 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 TINAGQ9UJW2 476 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 LSM7Q9UK45 103 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 SH2B3Q9UQQ2 575 aa7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 RPL36Q9Y3U8 105 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 PCDHGA9Q9Y5G4 932 aaKnown RBP7.8□□□□□ -1.16
CDC42SE1-201ENST00000357235 A0A0G2JN53 185 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 A0A1W2PPL8 197 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 hCG_1807616A0A1W2PRN6 198 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 KRBOX1C9JBD0 128 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC30A4O14863 429 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 ORC5O43913 435 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 PLOD3O60568 738 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 CH25HO95992 272 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 OSMP13725 252 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 PRKAR1BP31321 381 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 MAP2K3P46734 347 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 SSTP61278 116 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 TBPL1P62380 186 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 SP140Q13342 867 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 TSC22D1Q15714 1073 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 SNAPC1Q16533 368 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 MPEG1Q2M385 716 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 CDKL4Q5MAI5 379 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 LCN1P1Q5VSP4 162 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 METTL11BQ5VVY1 283 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 MZT2BQ6NZ67 158 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 B3GLCTQ6Y288 498 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 RASSF6Q6ZTQ3 369 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 CHMP1BQ7LBR1 199 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 TRMT11Q7Z4G4 463 aaKnown RBP7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 HSD11B1LQ7Z5J1 315 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 LHFPL3Q86UP9 236 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 CFAP206Q8IYR0 622 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 Q8N402 240 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 PCSK9Q8NBP7 692 aaKnown RBP7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 ZNF461Q8TAF7 563 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 CHTF18Q8WVB6 975 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 XAGE5Q8WWM1 108 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 SORCS2Q96PQ0 1159 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 WFDC6Q9BQY6 131 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 TMED9Q9BVK6 235 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 TAPBPLQ9BX59 468 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC19A3Q9BZV2 496 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 ABCG4Q9H172 646 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 HEXA-AS1Q9H8Q6 139 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 GALNT9Q9HCQ5 603 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 CREBZFQ9NS37 354 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 CUEDC1Q9NWM3 386 aaPredicted RBP7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 TRPC4Q9UBN4 977 aa7.79□□□□□ -1.16
CDC42SE1-201ENST00000357235 SEC14L3Q9UDX4 400 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms