RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 EEF1E1-BLOC1S5C9J1V9 151 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 SC5DO75845 299 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 FARS2O95363 451 aaKnown RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 HNRNPFP52597 415 aaKnown RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 INHBCP55103 352 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 GPM6BQ13491 265 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 GTDC1Q4AE62 458 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 RAB6CQ53S08 254 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 EOGTQ5NDL2 527 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 OR52E2Q8NGJ4 325 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 OR2M4Q96R27 311 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 RAB6CQ9H0N0 254 aa14.14□□□□□ -0.15
CHD4-201ENST00000357008 COL1A1P02452 1464 aaPredicted RBP14.14□□□□□ -0.15
CHD4-201ENST00000357008 STK19P49842 368 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 DEFB134Q4QY38 66 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 PLAG1Q6DJT9 500 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 WDR53Q7Z5U6 358 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 TMEM173Q86WV6 379 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 ANKK1Q8NFD2 765 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 MMABQ96EY8 250 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 DCAF13Q9NV06 445 aaKnown RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 B3GNT3Q9Y2A9 372 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 MYH8P13535 1937 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 MAS1P04201 325 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 DRD5P21918 477 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 GPX3P22352 226 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 VSX2P58304 361 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 PLGLB1Q02325 96 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 UBXN2BQ14CS0 331 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 METTL11BQ5VVY1 283 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 LAS2Q8IYD9 372 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 UTP4Q969X6 686 aaKnown RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 ZBTB20Q9HC78 741 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 SLC7A11Q9UPY5 501 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 HMX3A6NHT5 357 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 KLK3P07288 261 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 PTH2RP49190 550 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 FAM189BP81408 668 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 ZNF616Q08AN1 781 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 CNIH2Q6PI25 160 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 PELOQ9BRX2 385 aaKnown RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 UNKLQ9H9P5 680 aaKnown RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 PIGBOS1A0A0B4J2F0 54 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 TCRBV3S1A0A5B6 114 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 B8ZZF3 427 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 E2F3O00716 465 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 CCNOP22674 350 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 CD68P34810 354 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 TP53INP2Q8IXH6 220 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 OR13C3Q8NGS6 347 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 OR2T4Q8NH00 348 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 FKBP10Q96AY3 582 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 APIPQ96GX9 242 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 GAS2L1Q99501 681 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 SLC12A9Q9BXP2 914 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 NUBP2Q9Y5Y2 271 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 SF3A2Q15428 464 aaKnown RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 PM20D1Q6GTS8 502 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 NAGSQ8N159 534 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 MSLNLQ96KJ4 702 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 IL17FQ96PD4 163 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 WDR77Q9BQA1 342 aaPredicted RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 INPP5KQ9BT40 448 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 DPH7Q9BTV6 452 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 SMG9Q9H0W8 520 aaKnown RBP14.13□□□□□ -0.15
CHD4-201ENST00000357008 HIF3AQ9Y2N7 669 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 GPR52Q9Y2T5 361 aa14.13□□□□□ -0.15
CHD4-201ENST00000357008 LOC285095A0A1B0GVY8 99 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 NAP1L6A6NFF2 107 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 AMY2AP04746 511 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 CDKN2CP42773 168 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 LSSP48449 732 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 RAB41Q5JT25 222 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 LETMD1Q6P1Q0 360 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 DUS1LQ6P1R4 473 aaKnown RBP14.12□□□□□ -0.15
CHD4-201ENST00000357008 SLC2A4RGQ9NR83 387 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 DKKL1Q9UK85 242 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 MYH10P35580 1976 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 RFPL3O75679 317 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 NR4A2P43354 598 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 C18orf21Q32NC0 220 aaPredicted RBP14.12□□□□□ -0.15
CHD4-201ENST00000357008 COMMD6Q7Z4G1 85 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 ZFP90Q8TF47 636 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 PTERQ96BW5 349 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 PTCHD1Q96NR3 888 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 OR5B12Q96R08 314 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 TMEM121BQ9BXQ6 578 aaPredicted RBP14.12□□□□□ -0.15
CHD4-201ENST00000357008 RTCAO00442 366 aaKnown RBP14.12□□□□□ -0.15
CHD4-201ENST00000357008 PRAF2O60831 178 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 TRAPPC6AO75865 159 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 AKR1C4P17516 323 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 RPS15AP62244 130 aaKnown RBP14.12□□□□□ -0.15
CHD4-201ENST00000357008 GRASPQ7Z6J2 395 aaPredicted RBP14.12□□□□□ -0.15
CHD4-201ENST00000357008 NRMQ8IXM6 262 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 ALDH16A1Q8IZ83 802 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 OR9Q2Q8NGE9 314 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 STRA6Q9BX79 667 aa14.12□□□□□ -0.15
CHD4-201ENST00000357008 MTHFD2LQ9H903 347 aaPredicted RBP14.12□□□□□ -0.15
CHD4-201ENST00000357008 TEX10Q9NXF1 929 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms