RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 FKBP7Q9Y680 259 aa17.63■□□□□ 0.41
SCARF1-202ENST00000348987 A0A1B0GVC2 190 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 A6NIN4 97 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 PTBP1P26599 531 aaKnown RBP eCLIP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 GABRA5P31644 462 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 BMP8BP34820 402 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 SOX18P35713 384 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 OPRD1P41143 372 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 PFN3P60673 137 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 RAB8AP61006 207 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 IRF8Q02556 426 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 TLE2Q04725 743 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 TUSC1Q2TAM9 212 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 BHLHB9Q6PI77 547 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 SHFQ7M4L6 423 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 BMP8AQ7Z5Y6 402 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 VWCEQ96DN2 955 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 RBCK1Q9BYM8 510 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 GSX2Q9BZM3 304 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 B4GALT6Q9UBX8 382 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 CCDC88CQ9P219 2028 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 IGLV3-16A0A075B6K0 115 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 GNG14A0A1W2PPG7 69 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 A0A1W2PPL8 197 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 A0A1W2PRG6 482 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 C7orf66A4D0T2 115 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 KHNYNO15037 678 aaKnown RBP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 KPNA5O15131 536 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 SEMA7AO75326 666 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 LATS1O95835 1130 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 HRGP04196 525 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 OR56A5P0C7T3 313 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 FGF9P31371 208 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 CHI3L1P36222 383 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 EPHB3P54753 998 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 DCDC1P59894 354 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 EEF1A2Q05639 463 aaKnown RBP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 BAMBIQ13145 260 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 CAMK2DQ13557 499 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 LILRA3Q8N6C8 439 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 OR52N2Q8NGI0 321 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 OR10Z1Q8NGY1 313 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 OR8K5Q8NH50 307 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 POF1BQ8WVV4 589 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 ECHDC3Q96DC8 303 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 OTUB1Q96FW1 271 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 THAP7Q9BT49 309 aaPredicted RBP17.62■□□□□ 0.41
SCARF1-202ENST00000348987 LINC00597Q9H2U6 94 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 OR51J1Q9H342 316 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 BRD9Q9H8M2 597 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 DNAJC11Q9NVH1 559 aa17.62■□□□□ 0.41
SCARF1-202ENST00000348987 C2orf92A0A1B0GVN3 265 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 OR2AG2A6NM03 316 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 TOXO94900 526 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 ACSM4P0C7M7 580 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 BTCP35070 178 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 MAPK8P45983 427 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 CSNK1DP48730 415 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 SRP9P49458 86 aaKnown RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 DEFB103AP81534 67 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 CRYZQ08257 329 aaKnown RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 SLC5A12Q1EHB4 618 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 CCSMST1Q4G0I0 132 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 XKR6Q5GH73 641 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 C3orf38Q5JPI3 329 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 ASTLQ6HA08 431 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 KRT74Q7RTS7 529 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 IL17RCQ8NAC3 791 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 NEIL3Q8TAT5 605 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 KCND3Q9UK17 655 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 GFYI3L273 518 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 RFXAPO00287 272 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 ATG13O75143 517 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 LALBAP00709 142 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 IFNA14P01570 189 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 SPINT3P49223 89 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 SMSP52788 366 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 C21orf58P58505 322 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 ELOAQ14241 798 aaKnown RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 DCST1Q5T197 706 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 MZT2AQ6P582 158 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 Q6ZVU0 165 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 FIBINQ8TAL6 211 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 WDR20Q8TBZ3 569 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 CIDECQ96AQ7 238 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 NXPE2Q96DL1 559 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 C11orf24Q96F05 449 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 ZNF582Q96NG8 517 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 MS4A7Q9GZW8 240 aaPredicted RBP17.61■□□□□ 0.41
SCARF1-202ENST00000348987 RNF208Q9H0X6 261 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 MCCC2Q9HCC0 563 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 ZSCAN32Q9NX65 697 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 MAB21L2Q9Y586 359 aa17.61■□□□□ 0.41
SCARF1-202ENST00000348987 PLXNB3Q9ULL4 1909 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 RNASET2O00584 256 aaKnown RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 GBAP04062 536 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 OR12D1P0DN82 309 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 ATP1B2P14415 290 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-202ENST00000348987 DNASE1P24855 282 aa17.6■□□□□ 0.41
SCARF1-202ENST00000348987 ELAVL4P26378 380 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms