RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 NPAS4Q8IUM7 802 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 ABCA1O95477 2261 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 HEATR5BQ9P2D3 2071 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF536O15090 1300 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 UPK3BL1B0FP48 263 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 UPK3BL2E5RIL1 263 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 AHSGP02765 367 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 LPLP06858 475 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 AK4P27144 223 aaPredicted RBP18.51■□□□□ 0.55
HDAC4-201ENST00000345617 DYRK1AQ13627 763 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 FAM122CQ6P4D5 195 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 SLC9B2Q86UD5 537 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 KCTD12Q96CX2 325 aaKnown RBP18.51■□□□□ 0.55
HDAC4-201ENST00000345617 MCHR1Q99705 422 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.51■□□□□ 0.55
HDAC4-201ENST00000345617 SELPP16109 830 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 VIPR1P32241 457 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 NDUFV1P49821 464 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 KIAA1211LQ6NV74 962 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 DPY19L2P1Q6NXN4 242 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 SARDHQ9UL12 918 aa18.51■□□□□ 0.55
HDAC4-201ENST00000345617 GGT1P19440 569 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 CDKN1CP49918 316 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 PIM3Q86V86 326 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 SCML2Q9UQR0 700 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 IL33O95760 270 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 TIA1P31483 386 aaKnown RBP eCLIP18.5■□□□□ 0.553e-6■■■□□ 15.8
HDAC4-201ENST00000345617 PBX2P40425 430 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 AWAT2Q6E213 333 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 VITQ6UXI7 678 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF704Q6ZNC4 412 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 SMPDL3BQ92485 455 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 B4GALT7Q9UBV7 327 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 DNMT3AQ9Y6K1 912 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 RGPD2P0DJD1 1756 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 FGF3P11487 239 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF43P17038 809 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 TAS2R30P59541 319 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 GRIN2CQ14957 1233 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 EEF1DP3Q658K8 133 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 GAREM2Q75VX8 874 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 TMEM185AQ8NFB2 350 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 OR2T4Q8NH00 348 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 MSI2Q96DH6 328 aaKnown RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 SCN4AP35499 1836 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 NUDT19A8MXV4 375 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 TNFP01375 233 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 DCNP07585 359 aaKnown RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 CXCL9Q07325 125 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 MLIPQ5VWP3 458 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 TRMT10AQ8TBZ6 339 aaKnown RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 HAS2Q92819 552 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 RBCK1Q9BYM8 510 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 YJEFN3A6XGL0 299 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 ELOAQ14241 798 aaKnown RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 ANKMY1Q9P2S6 941 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 A0A0A6YYH2 397 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 A6NJ64 397 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 RNH1P13489 461 aaKnown RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 LSSP48449 732 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 KIAA0907Q7Z7F0 614 aaPredicted RBP18.5■□□□□ 0.55
HDAC4-201ENST00000345617 SORCS1Q8WY21 1168 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 NPIPA7E9PJI5 369 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 VEGFDO43915 354 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 NPIPA8P0DM63 369 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 ITGAMP11215 1152 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 OR2M4Q96R27 311 aa18.5■□□□□ 0.55
HDAC4-201ENST00000345617 HBE1P02100 147 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 PCK2Q16822 640 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 TP53TG5Q9Y2B4 290 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF142P52746 1687 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ADH1BP00325 375 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 HOXD1Q9GZZ0 328 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 FAM212BQ9NTI7 297 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 PIGVQ9NUD9 493 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 TAC3Q9UHF0 121 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 NALCNQ8IZF0 1738 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 LOC285095A0A1B0GVY8 99 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ZBTB48P10074 688 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ACTBL2Q562R1 376 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 CLEC20AQ6ZU45 233 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 MFFQ9GZY8 342 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 NSUN3Q9H649 340 aaKnown RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF705GA8MUZ8 300 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 KCNJ13O60928 360 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 PAPD5Q8NDF8 572 aaKnown RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF417Q8TAU3 575 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 CDCA5Q96FF9 252 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 SLC38A8A6NNN8 435 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 PLAG1Q6DJT9 500 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 NRROSQ86YC3 692 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 OR5AK2Q8NH90 309 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 DMAC2Q9NW81 257 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 CA5BQ9Y2D0 317 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ATG2BQ96BY7 2078 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 EIF3FO00303 357 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 BCAS1O75363 584 aaPredicted RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 DRD2P14416 443 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 BPIP17213 487 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 TAS2R46P59540 309 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms