RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 BCAP29Q9UHQ4 241 aa13.25□□□□□ -0.29
HMGN3-202ENST00000344726 EXO1Q9UQ84 846 aaKnown RBP13.25□□□□□ -0.29
HMGN3-202ENST00000344726 POLR3HQ9Y535 204 aaPredicted RBP13.25□□□□□ -0.29
HMGN3-202ENST00000344726 A0A1B0GVC2 190 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ATP6AP2A0A1C7CYW4 349 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 H3BQF6 201 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 TRIM13O60858 407 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 CRCPO75575 148 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ATP6AP2O75787 350 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 RSL1D1O76021 490 aaKnown RBP13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ENDOUP21128 410 aaKnown RBP13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ABCD3P28288 659 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 EMDP50402 254 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 KCNJ2P63252 427 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 IFFO1Q0D2I5 559 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF763Q0D2J5 394 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 HEPACAMQ14CZ8 416 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 KIAA0040Q15053 153 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 RPS6KA2Q15349 733 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 IMPG1Q17R60 797 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 FAM71E1Q6IPT2 247 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 OR9A2Q8NGT5 310 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 OR2T11Q8NH01 316 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 CDC26Q8NHZ8 85 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 SPPL2AQ8TCT8 520 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 TCP10LQ8TDR4 215 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 DIO2Q92813 273 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 KAT2AQ92830 837 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 PARD6BQ9BYG5 372 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 TRIM8Q9BZR9 551 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ROPN1BQ9BZX4 212 aaPredicted RBP13.24□□□□□ -0.29
HMGN3-202ENST00000344726 TUBB1Q9H4B7 451 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF703Q9H7S9 590 aaPredicted RBP13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ROPN1Q9HAT0 212 aaPredicted RBP13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ZFP64Q9NPA5 681 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 PFDN4Q9NQP4 134 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 SLC35C2Q9NQQ7 365 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 PNPLA3Q9NST1 481 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 MID2Q9UJV3 735 aa13.24□□□□□ -0.29
HMGN3-202ENST00000344726 ANKRD33BA6NCL7 494 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 TMEM233B4DJY2 109 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 NPIPA2E9PIF3 369 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 NPIPA3F8WFD2 350 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 AZIN1O14977 448 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 TRIM3O75382 744 aaPredicted RBP13.23□□□□□ -0.29
HMGN3-202ENST00000344726 CHRNGP07510 517 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 ABCB1P08183 1280 aaPredicted RBP13.23□□□□□ -0.29
HMGN3-202ENST00000344726 DDCP20711 480 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 PRPH2P23942 346 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 TACR1P25103 407 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 ARRB2P32121 409 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 NRG3P56975 720 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 C2orf80Q0P641 193 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 FNDC7Q5VTL7 733 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 NOXRED1Q6NXP6 359 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 PAOXQ6QHF9 649 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 Q6ZSR9 355 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF295-AS1Q8N0V1 137 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 MREGQ8N565 214 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 ZNF454Q8N9F8 522 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 ACBD4Q8NC06 268 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 OR5M9Q8NGP3 310 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 SDCCAG3Q96C92 435 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 NTNG2Q96CW9 530 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 EGLN2Q96KS0 407 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 SMC6Q96SB8 1091 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 DOHHQ9BU89 302 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 IQCGQ9H095 443 aaKnown RBP13.23□□□□□ -0.29
HMGN3-202ENST00000344726 MYNNQ9NPC7 610 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 CHST11Q9NPF2 352 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 RRAGDQ9NQL2 400 aaPredicted RBP13.23□□□□□ -0.29
HMGN3-202ENST00000344726 EHD3Q9NZN3 535 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 SPRR3Q9UBC9 169 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 BOKQ9UMX3 212 aaPredicted RBP13.23□□□□□ -0.29
HMGN3-202ENST00000344726 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 FAM215AQ9Y5M1 114 aa13.23□□□□□ -0.29
HMGN3-202ENST00000344726 CREBBPQ92793 2442 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 KIAA1549Q9HCM3 1950 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 MYO1GB0I1T2 1018 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 NPIPB8E9PQR5 432 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 TP53I11O14683 189 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 PPM1BO75688 479 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 CASP3P42574 277 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 GSTM5P46439 218 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 TMED10P49755 219 aaKnown RBP13.22□□□□□ -0.29
HMGN3-202ENST00000344726 SLC10A1Q14973 349 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 GXYLT1Q4G148 440 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 KANK2Q63ZY3 851 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 RTL6Q6ICC9 239 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 ZCCHC23Q6ZST2 131 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 OR7G2Q8NG99 324 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 FAM76AQ8TAV0 307 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 HGDQ93099 445 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 LCORQ96JN0 433 aaPredicted RBP13.22□□□□□ -0.29
HMGN3-202ENST00000344726 JSRP1Q96MG2 331 aaPredicted RBP13.22□□□□□ -0.29
HMGN3-202ENST00000344726 RILPQ96NA2 401 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 NODALQ96S42 347 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 TMEM109Q9BVC6 243 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 ANGPTL4Q9BY76 406 aa13.22□□□□□ -0.29
HMGN3-202ENST00000344726 TP63Q9H3D4 680 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms