RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 NADKO95544 446 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 TRHRP34981 398 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 GPC1P35052 558 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 CYB561P49447 251 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 HLCSP50747 726 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 NR0B1P51843 470 aaKnown RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 PRR30Q53SZ7 412 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 OR4F3Q6IEY1 312 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 IL20RBQ6UXL0 311 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 TMEM64Q6YI46 380 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 ACAD11Q709F0 780 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 CPLX4Q7Z7G2 160 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 MDS2Q8NDY4 140 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 ASB15Q8WXK1 588 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 ELP4Q96EB1 424 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 DUSP26Q9BV47 211 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 NSRP1Q9H0G5 558 aaKnown RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 KLHL1Q9NR64 748 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 AGPAT4Q9NRZ5 378 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 ACSS1Q9NUB1 689 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 ATAD3AQ9NVI7 634 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 DDX18Q9NVP1 670 aaKnown RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 MAP10Q9P2G4 905 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 DCTN4Q9UJW0 460 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 A0A087WV62 115 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 A0A1W2PRB8 838 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 UPK1AO00322 258 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 PLOD2O00469 737 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 UBDO15205 165 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 C6orf47O95873 294 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 DRD4P21917 467 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 IL12AP29459 219 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 GABPB1Q06547 395 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 SF3A3Q12874 501 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTSL-201ENST00000340342 ESPL1Q14674 2120 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 PIGGQ5H8A4 983 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 SPANXN4Q5MJ08 99 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 HLA-DQA1Q5Y7H0 255 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 MDGA2Q7Z553 956 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 WDR53Q7Z5U6 358 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 CAMKMTQ7Z624 323 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 PRR22Q8IZ63 422 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 CYP4Z2PQ8N1L4 340 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 OR2L13Q8N349 312 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 HORMAD2Q8N7B1 307 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 ZFP28Q8NHY6 868 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 ERP27Q96DN0 273 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 CCT8L2Q96SF2 557 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 PRPF18Q99633 342 aaKnown RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 BHLHE41Q9C0J9 482 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 NXF5Q9H1B4 397 aaKnown RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 SIRT3Q9NTG7 399 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 ASF1BQ9NVP2 202 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 C19orf53Q9UNZ5 99 aaPredicted RBP13.13□□□□□ -0.31
CTSL-201ENST00000340342 PCDHGB6Q9Y5F9 930 aa13.13□□□□□ -0.31
CTSL-201ENST00000340342 A8MVJ9 347 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 SLC25A12O75746 678 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 FAM107AO95990 144 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 ABCB1P08183 1280 aaPredicted RBP13.12□□□□□ -0.31
CTSL-201ENST00000340342 IDO1P14902 403 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 DDX5P17844 614 aaKnown RBP13.12□□□□□ -0.31
CTSL-201ENST00000340342 DGKQP52824 942 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 WNT3P56703 355 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 CORO7P57737 925 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 PHC1P78364 1004 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 ZNF155Q12901 538 aaPredicted RBP13.12□□□□□ -0.31
CTSL-201ENST00000340342 RPS6KA2Q15349 733 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 INAQ16352 499 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 FAM174BQ3ZCQ3 159 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 ZNF766Q5HY98 468 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 CGB2Q6NT52 195 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 LYPD8Q6UX82 237 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 SZRD1Q7Z422 152 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 ANKRD46Q86W74 232 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 CLECL1Q8IZS7 167 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 OR9I1Q8NGQ6 314 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 SLC22A8Q8TCC7 542 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 TESCQ96BS2 214 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 VSTM2LQ96N03 204 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 TRIM45Q9H8W5 580 aaPredicted RBP13.12□□□□□ -0.31
CTSL-201ENST00000340342 FOLH1BQ9HBA9 442 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 HPF1Q9NWY4 346 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 PRODH2Q9UF12 536 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 ERVK-11Q9UQG0 969 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 CFL2Q9Y281 166 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 SNX8Q9Y5X2 465 aa13.12□□□□□ -0.31
CTSL-201ENST00000340342 A0A0G2JND7 137 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 RRP9O43818 475 aaKnown RBP13.11□□□□□ -0.31
CTSL-201ENST00000340342 BCAS2O75934 225 aaPredicted RBP13.11□□□□□ -0.31
CTSL-201ENST00000340342 SLITRK5O94991 958 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 PSMG1O95456 288 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 KIR3DL1P43629 444 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 CLNS1AP54105 237 aaKnown RBP13.11□□□□□ -0.31
CTSL-201ENST00000340342 PRKAG1P54619 331 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 PMP22Q01453 160 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 SRSF11Q05519 484 aaKnown RBP13.11□□□□□ -0.31
CTSL-201ENST00000340342 MLC1Q15049 377 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 GSTA3Q16772 222 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 PDCD4Q53EL6 469 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms