RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 LOXL4Q96JB6 756 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RNF170Q96K19 258 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RBP7Q96R05 134 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 WDR83Q9BRX9 315 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 POMKQ9H5K3 350 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TFB2MQ9H5Q4 396 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PDP1Q9P0J1 537 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FBXL3Q9UKT7 428 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MYO18BQ8IUG5 2567 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 AGAP5A6NIR3 686 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NOBOXO60393 691 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 C22orf31O95567 290 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PRKCGP05129 697 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 UGT2B4P06133 528 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF28P17035 718 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CHRNB2P17787 502 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PTAFRP25105 342 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KIR2DL3P43628 341 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PREPP48147 710 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ARHGAP1Q07960 439 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ADIGQ0VDE8 80 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 BTBD16Q32M84 506 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 WSCD1Q658N2 575 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SHC4Q6S5L8 630 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TRIM74Q86UV6 250 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TRIM73Q86UV7 250 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CADM2Q8N3J6 435 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF781Q8N8C0 355 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF565Q8N9K5 539 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GALNT11Q8NCW6 608 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR52K2Q8NGK3 314 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZDHHC1Q8WTX9 485 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PCNPQ8WW12 178 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NSMAFQ92636 917 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DGAT2Q96PD7 388 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 WRAP53Q9BUR4 548 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF471Q9BX82 626 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DPH1Q9BZG8 443 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC25A51Q9H1U9 297 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF106Q9H2Y7 1883 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PIGMQ9H3S5 423 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 METTL7AQ9H8H3 244 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 LRTM1Q9HBL6 345 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MID1IP1Q9NPA3 183 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RHBDL2Q9NX52 303 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FLRT1Q9NZU1 646 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 P2RX2Q9UBL9 471 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 VWA7Q9Y334 891 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 INSL5Q9Y5Q6 135 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PMF1-BGLAPU3KQ54 211 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 XKRY2A2RUG3 117 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CDC14CA4D256 554 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR6C74A6NCV1 312 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FIGNL2A6NMB9 653 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MAGEB17A8MXT2 336 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 H3BNC9 293 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FAAHO00519 579 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TAAR5O14804 337 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CASC3O15234 703 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC16A5O15375 505 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TSPAN6O43657 245 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SELENOFO60613 162 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RAD1O60671 282 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OAS1P00973 400 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SNHG28P0DPA3 235 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CTSAP10619 480 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GLB1P16278 677 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MPLP40238 635 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ASPAP45381 313 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 HMGA2P52926 109 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RAG2P55895 527 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PHC1P78364 1004 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC17A1Q14916 467 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF529Q6P280 563 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC26A9Q7LBE3 791 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLCO6A1Q86UG4 719 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KIAA0319LQ8IZA0 1049 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CMTM8Q8IZV2 173 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NXPE1Q8N323 547 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ARL14EPQ8N8R7 260 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DEFB124Q8NES8 71 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ABHD11Q8NFV4 315 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR1J4Q8NGS1 313 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TCP10LQ8TDR4 215 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FGF11Q92914 225 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF559Q9BR84 538 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DUSP16Q9BY84 665 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FAM212BQ9NTI7 297 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC35D1Q9NTN3 355 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RPH3AQ9Y2J0 694 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CEPT1Q9Y6K0 416 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PEX10O60683 326 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR5F1O95221 314 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CYP11A1P05108 521 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 EPHA4P54764 986 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CASP9P55211 416 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RAB1AP62820 205 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GPR50Q13585 617 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF267Q14586 743 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PEA15Q15121 130 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms