RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 AGPAT4Q9NRZ5 378 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 SLC39A1Q9NY26 324 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 WDFY3Q8IZQ1 3526 aa13.72□□□□□ -0.21
CBX3-201ENST00000337620 FER1L5A0AVI2 2057 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 DUXAA6NLW8 204 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 A8MUA0 341 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 ASNA1O43681 348 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 CBX7O95931 251 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 IFNA14P01570 189 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 NBL1P41271 181 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 MAPK10P53779 464 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 CRISP3P54108 245 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 SELENOWP63302 87 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 TXNL4AP83876 142 aaKnown RBP13.71□□□□□ -0.21
CBX3-201ENST00000337620 RHAGQ02094 409 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 OCA2Q04671 838 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.71□□□□□ -0.21
CBX3-201ENST00000337620 C16orf62Q7Z3J2 963 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 SMYD1Q8NB12 490 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 STT3BQ8TCJ2 826 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 CDS1Q92903 461 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 TREX2Q9BQ50 279 aaPredicted RBP13.71□□□□□ -0.21
CBX3-201ENST00000337620 PELOQ9BRX2 385 aaKnown RBP13.71□□□□□ -0.21
CBX3-201ENST00000337620 FBXO8Q9NRD0 319 aa13.71□□□□□ -0.21
CBX3-201ENST00000337620 CPNE3O75131 537 aaKnown RBP13.7□□□□□ -0.22
CBX3-201ENST00000337620 ACP2P11117 423 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 S1PR1P21453 382 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 SSTR4P31391 388 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 FOXL2P58012 376 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 FUT5Q11128 374 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 GNA13Q14344 377 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 NSDHLQ15738 373 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 STPG1Q5TH74 334 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 METTL25Q8N6Q8 603 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 LZICQ8WZA0 190 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ZNF607Q96SK3 696 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 DOHHQ9BU89 302 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 KLHL4Q9C0H6 718 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 VN1R1Q9GZP7 353 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 IRF2BPLQ9H1B7 796 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 VCX3BQ9H321 246 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 RUBCNLQ9H714 662 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 EXD2Q9NVH0 621 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 IFT80Q9P2H3 777 aaPredicted RBP13.7□□□□□ -0.22
CBX3-201ENST00000337620 ZNF639Q9UID6 485 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ERVK-19Q9WJR5 959 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 EP300Q09472 2414 aaPredicted RBP13.7□□□□□ -0.22
CBX3-201ENST00000337620 C17orf105B2RV13 164 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 MEN1O00255 615 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 CLOCKO15516 846 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 COQ9O75208 318 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 AGR2O95994 175 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 LDLRP01130 860 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 CHRM4P08173 479 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 IFI6P09912 130 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ALOX5P09917 674 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ZGLP1P0C6A0 271 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ZNF28P17035 718 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ITIH1P19827 911 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 EFNA3P52797 238 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ZNF155Q12901 538 aaPredicted RBP13.7□□□□□ -0.22
CBX3-201ENST00000337620 TRIP6Q15654 476 aaKnown RBP13.7□□□□□ -0.22
CBX3-201ENST00000337620 ATP6AP1Q15904 470 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 DUSP5Q16690 384 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 CYP27C1Q4G0S4 372 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 OGFRL1Q5TC84 451 aaPredicted RBP13.7□□□□□ -0.22
CBX3-201ENST00000337620 MLIPQ5VWP3 458 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ZDHHC21Q8IVQ6 265 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 CDRT4Q8N9R6 151 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 PMEPA1Q969W9 287 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 EME1Q96AY2 570 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 CENPNQ96H22 339 aaPredicted RBP13.7□□□□□ -0.22
CBX3-201ENST00000337620 LIPT1Q9Y234 373 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 ZNF451Q9Y4E5 1061 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 LOXL2Q9Y4K0 774 aa13.7□□□□□ -0.22
CBX3-201ENST00000337620 IGKV3D-11A0A0A0MRZ8 115 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 TMEM229AB2RXF0 380 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 PDE9AO76083 593 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 H6PDO95479 791 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 CST1P01037 141 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 DUSP8Q13202 625 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 ELOAQ14241 798 aaKnown RBP13.69□□□□□ -0.22
CBX3-201ENST00000337620 ZNF385CQ66K41 422 aaPredicted RBP13.69□□□□□ -0.22
CBX3-201ENST00000337620 ZCCHC12Q6PEW1 402 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 KRT73Q86Y46 540 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 TMEM151BQ8IW70 566 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 SPPL2AQ8TCT8 520 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 GPR151Q8TDV0 419 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 VPS50Q96JG6 964 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 COL21A1Q96P44 957 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 TGIF2Q9GZN2 237 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 SOX17Q9H6I2 414 aaPredicted RBP13.69□□□□□ -0.22
CBX3-201ENST00000337620 GIN1Q9NXP7 522 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 CLCA3PQ9Y6N3 262 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 KIF26BQ2KJY2 2108 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 SAC3D1A6NKF1 404 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 A8MVJ9 347 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 hCG_2039718K7EN88 272 aa13.69□□□□□ -0.22
CBX3-201ENST00000337620 GNGT2O14610 69 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms