RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 PLD1Q13393 1074 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 MPPE1Q53F39 396 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 QSOX2Q6ZRP7 698 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 SLC30A8Q8IWU4 369 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 FAM26EQ8N5C1 309 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 DCAF4L2Q8NA75 395 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 FNDC11Q9BVV2 318 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 PIGUQ9H490 435 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 MVB12BQ9H7P6 319 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 ZC4H2Q9NQZ6 224 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 NUDT15Q9NV35 164 aa12.99□□□□□ -0.33
SYNE3-201ENST00000334258 GSAPA4D1B5 854 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 GTPBP1O00178 669 aaKnown RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 RECKO95980 971 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 PAHP00439 452 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 GABRA5P31644 462 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF81P51508 661 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 PTSQ03393 145 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 RGS1Q08116 209 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 GPR176Q14439 515 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 MPEG1Q2M385 716 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SLC39A5Q6ZMH5 540 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 COMMD7Q86VX2 200 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 C16orf78Q8WTQ4 265 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 CREB3L1Q96BA8 519 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 VN1R3Q9BXE9 311 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 EIF3KQ9UBQ5 218 aaKnown RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 A0A0B4J203 849 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 TMEM202A6NGA9 273 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 TMEM189-UBE2V1I3L0A0 370 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 PRRG1O14668 218 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 EPHX1P07099 455 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 STOMP27105 288 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 CD79BP40259 229 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 MAPK8P45983 427 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 MTNR1AP48039 350 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 DBPQ10586 325 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 TPBGQ13641 420 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SLBPQ14493 270 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 RNASE12Q5GAN4 147 aaKnown RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 CLEC12AQ5QGZ9 265 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 FIP1L1Q6UN15 594 aaKnown RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 IQCHQ86VS3 1027 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 NPAS4Q8IUM7 802 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 HORMAD2Q8N7B1 307 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 ST8SIA2Q92186 375 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 MARC2Q969Z3 335 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 CXorf40BQ96DE9 158 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 ATF6BQ99941 703 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 KCND3Q9UK17 655 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SLC9A3R1O14745 358 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 CHP2O43745 196 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SOCS5O75159 536 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 IL3P08700 152 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 IRS1P35568 1242 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 AGFG1P52594 562 aaKnown RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SMIM11AP58511 58 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 DCDC1P59894 354 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 LSM11P83369 360 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 C3orf38Q5JPI3 329 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 PODNL1Q6PEZ8 512 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 METAP1DQ6UB28 335 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF782Q6ZMW2 699 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 METTL3Q86U44 580 aaKnown RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 LILRA3Q8N6C8 439 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 GPR32P1Q8NGA4 272 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 OR4K5Q8NGD3 323 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SCRN2Q96FV2 425 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 ART5Q96L15 291 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 POLDIP3Q9BY77 421 aaKnown RBP12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SLC6A16Q9GZN6 736 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 SERHL2Q9H4I8 314 aa12.98□□□□□ -0.33
SYNE3-201ENST00000334258 LOC105369274A0A096LPK9 316 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 STK25O00506 426 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 AKAP8O43823 692 aaKnown RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 SLC28A2O43868 658 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 SEMA7AO75326 666 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 HLA-DPB1P04440 258 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 MANFP55145 182 aaKnown RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 COX10Q12887 443 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 HSPB3Q12988 150 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 ADGRD2Q7Z7M1 963 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 OR4N4Q8N0Y3 316 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 ZNF655Q8N720 491 aaPredicted RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 GALNT11Q8NCW6 608 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 SMG7Q92540 1137 aaKnown RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 MRPS31Q92665 395 aaKnown RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 OTUB1Q96FW1 271 aaPredicted RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 TOE1Q96GM8 510 aaKnown RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 SENP5Q96HI0 755 aaPredicted RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 SORBS1Q9BX66 1292 aaKnown RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 ZDHHC6Q9H6R6 413 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 RANBP3Q9H6Z4 567 aaPredicted RBP12.97□□□□□ -0.33
SYNE3-201ENST00000334258 PTGFRNQ9P2B2 879 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 VWA8A3KMH1 1905 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 AGAP14A8MT82 685 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 M0R3H8 397 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 RFXAPO00287 272 aa12.97□□□□□ -0.33
SYNE3-201ENST00000334258 CH25HO95992 272 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms