RNA–Protein interactions for RNA: ENST00000332859.10

SUMO3-201, Transcript of small ubiquitin-like modifier 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO3, Length 1,807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-201ENST00000332859 RIBC2Q9H4K1 309 aa18.87■□□□□ 0.61
SUMO3-201ENST00000332859 ZNF768Q9H5H4 540 aaKnown RBP18.87■□□□□ 0.61
SUMO3-201ENST00000332859 KRT84Q9NSB2 600 aa18.87■□□□□ 0.61
SUMO3-201ENST00000332859 TMEM150CB9EJG8 249 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 RNH1P13489 461 aaKnown RBP18.86■□□□□ 0.61
SUMO3-201ENST00000332859 MPLP40238 635 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 RPS26P62854 115 aaKnown RBP18.86■□□□□ 0.61
SUMO3-201ENST00000332859 COL9A2Q14055 689 aaPredicted RBP18.86■□□□□ 0.61
SUMO3-201ENST00000332859 GALNT5Q7Z7M9 940 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 ATG16L2Q8NAA4 619 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 DOK1Q99704 481 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 A4GALTQ9NPC4 353 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 NDUFAF4Q9P032 175 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 A8MU76 341 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 M0QX08 132 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 SLC1A7O00341 560 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 OR2B3O76000 313 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 MSL3P1P0C860 447 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 CPMP14384 443 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 PORP16435 677 aaPredicted RBP18.86■□□□□ 0.61
SUMO3-201ENST00000332859 RRM2P31350 389 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 PTGER1P34995 402 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 KHKP50053 298 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 CDK5R2Q13319 367 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 GPR19Q15760 415 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 ARMC8Q8IUR7 673 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 OR4N5Q8IXE1 308 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 GEMIN6Q8WXD5 167 aaKnown RBP18.86■□□□□ 0.61
SUMO3-201ENST00000332859 ELP4Q96EB1 424 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 TIMMDC1Q9NPL8 285 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 PCDHGA5Q9Y5G8 931 aa18.86■□□□□ 0.61
SUMO3-201ENST00000332859 DNAH14Q0VDD8 3507 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 BLACEA4D250 179 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 FAM227AF5H4B4 570 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 FGF17O60258 216 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 GPR75O95800 540 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 RPLP0P05388 317 aaKnown RBP18.85■□□□□ 0.61
SUMO3-201ENST00000332859 PCSK6P29122 969 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 PPP2R1BP30154 601 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 POLR2IP36954 125 aaKnown RBP18.85■□□□□ 0.61
SUMO3-201ENST00000332859 MC3RP41968 323 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 CLK3P49761 638 aaKnown RBP18.85■□□□□ 0.61
SUMO3-201ENST00000332859 CXCR4P61073 352 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 IL5RAQ01344 420 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 RAPSNQ13702 412 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 LAPTM4AQ15012 233 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 LTB4RQ15722 352 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 NEDD8Q15843 81 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 FAM214AQ32MH5 1076 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 LAIR2Q6ISS4 152 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 REEP3Q6NUK4 255 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 TSEN54Q7Z6J9 526 aaKnown RBP18.85■□□□□ 0.61
SUMO3-201ENST00000332859 TMEM52Q8NDY8 209 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 OR13F1Q8NGS4 319 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 ZNF300Q96RE9 604 aaPredicted RBP18.85■□□□□ 0.61
SUMO3-201ENST00000332859 DPYSL5Q9BPU6 564 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 HCN3Q9P1Z3 774 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 NDRG4Q9ULP0 352 aaKnown RBP18.85■□□□□ 0.61
SUMO3-201ENST00000332859 MRPS33Q9Y291 106 aaKnown RBP18.85■□□□□ 0.61
SUMO3-201ENST00000332859 GMPPBQ9Y5P6 360 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 VCANP13611 3396 aa18.85■□□□□ 0.61
SUMO3-201ENST00000332859 C5orf58C9J3I9 102 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 H0YIG0 161 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 OPN1SWP03999 348 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 CKMT1AP12532 417 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 MATN1P21941 496 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 DUSP3P51452 185 aaPredicted RBP18.84■□□□□ 0.61
SUMO3-201ENST00000332859 PRKAG1P54619 331 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 CCL7P80098 99 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 DAB2P98082 770 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 SPARTQ8N0X7 666 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 NUP43Q8NFH3 380 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 GIPC3Q8TF64 312 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 COL26A1Q96A83 441 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 MMABQ96EY8 250 aaPredicted RBP18.84■□□□□ 0.61
SUMO3-201ENST00000332859 PITX2Q99697 317 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 ARRDC1-AS1Q9H2J1 176 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 OR51I1Q9H343 314 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 LRRN3Q9H3W5 708 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 SERHL2Q9H4I8 314 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 FANCEQ9HB96 536 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 CUTCQ9NTM9 273 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 ATXN7L1Q9ULK2 861 aaPredicted RBP18.84■□□□□ 0.61
SUMO3-201ENST00000332859 LYVE1Q9Y5Y7 322 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 ARID1BQ8NFD5 2236 aaPredicted RBP18.84■□□□□ 0.61
SUMO3-201ENST00000332859 TMEM247A6NEH6 219 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 A8MVJ9 347 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 E9PQ18 207 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 H3BMH7 237 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 TNFRSF11BO00300 401 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 HMGN4O00479 90 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 LDB3O75112 727 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 DNAJB5O75953 348 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 SEC14L2O76054 403 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 ANKRD34CP0C6C1 535 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 FOLR1P15328 257 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 IL1RL1Q01638 556 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 ID2Q02363 134 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 PROX2Q3B8N5 592 aa18.84■□□□□ 0.61
SUMO3-201ENST00000332859 TSPYL5Q86VY4 417 aaPredicted RBP18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms