RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 M0R233 179 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 SSX5O60225 188 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 HK1P19367 917 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 HOXD9P28356 352 aaPredicted RBP17.17■□□□□ 0.34
PKP3-201ENST00000331563 VSX2P58304 361 aaPredicted RBP17.17■□□□□ 0.34
PKP3-201ENST00000331563 RAB8AP61006 207 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 BCL2L1Q07817 233 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 CRYZQ08257 329 aaKnown RBP17.17■□□□□ 0.34
PKP3-201ENST00000331563 B3GLCTQ6Y288 498 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 OVCH2Q7RTZ1 564 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 MS4A15Q8N5U1 240 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 OR4K1Q8NGD4 311 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 SOSTQ9BQB4 213 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 DPP7Q9UHL4 492 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 ACSL6Q9UKU0 697 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 A0A1B0GVC2 190 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 MGAT4DA6NG13 374 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 A6NIN4 97 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 PRMT3O60678 531 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 RIPPLY1Q0D2K3 151 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 UAP1L1Q3KQV9 507 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 HECTD3Q5T447 861 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 UNC5DQ6UXZ4 953 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 FAM92BQ6ZTR7 304 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 NLNQ9BYT8 704 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 POLR2J3Q9H1A7 115 aaKnown RBP17.17■□□□□ 0.34
PKP3-201ENST00000331563 DCAF16Q9NXF7 216 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 PTTG3PQ9NZH4 202 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 VPS29Q9UBQ0 182 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 TBX21Q9UL17 535 aa17.17■□□□□ 0.34
PKP3-201ENST00000331563 PCDHGA9Q9Y5G4 932 aaKnown RBP17.17■□□□□ 0.34
PKP3-201ENST00000331563 GNG14A0A1W2PPG7 69 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 C1orf226A1L170 272 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 DRGXA6NNA5 263 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 KPNA5O15131 536 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 PRAMEF12O95522 483 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 ALPIP09923 528 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 OR56A5P0C7T3 313 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 GJA1P17302 382 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 PUDPQ08623 228 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 CHIT1Q13231 466 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 NTRK2Q16620 822 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 MPPE1Q53F39 396 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 TXNDC8Q6A555 127 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 CEACAM20Q6UY09 585 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 RASSF6Q6ZTQ3 369 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 COQ10AQ96MF6 247 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 ZCCHC4Q9H5U6 513 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 HCN3Q9P1Z3 774 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 KIF25Q9UIL4 384 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 MAFFQ9ULX9 164 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 SLC9A8Q9Y2E8 581 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 YIPF1Q9Y548 306 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 PRUNE2Q8WUY3 3088 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 HEPACAM2A8MVW5 462 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 NRG2O14511 850 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 ABCD4O14678 606 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 SCAMP2O15127 329 aaKnown RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 SSNA1O43805 119 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 LANCL1O43813 399 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 STC2O76061 302 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 PLATP00750 562 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 HIST1H2AGP0C0S8 130 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 RHCEP18577 417 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 HIST1H2ADP20671 130 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 RECQLP46063 649 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 CDK6Q00534 326 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 ETFDHQ16134 617 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 ALG1LQ6GMV1 187 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 QSOX2Q6ZRP7 698 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 MARCH9Q86YJ5 346 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 GPR156Q8NFN8 814 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 BEST4Q8NFU0 473 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 OR5AK3PQ8NH89 298 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 NEIL3Q8TAT5 605 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 RFT1Q96AA3 541 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 SENP5Q96HI0 755 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 HIST1H2AHQ96KK5 128 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 LRR1Q96L50 414 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 HIST1H2AJQ99878 128 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 THAP7Q9BT49 309 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 H2AFJQ9BTM1 129 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 CRLS1Q9UJA2 301 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 TEX13CA0A0J9YWL9 993 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 BTF3P20290 206 aaKnown RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 MEOX2P50222 304 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 ANXA8L1Q5VT79 327 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 C17orf107Q6ZR85 190 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 UBE2R2Q712K3 238 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 KANSL1Q7Z3B3 1105 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 HUS1BQ8NHY5 278 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 TRIM43Q96BQ3 446 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 SLC35A5Q9BS91 424 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 ATG10Q9H0Y0 220 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 TTYH1Q9H313 450 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 SPATA6Q9NWH7 488 aaPredicted RBP17.16■□□□□ 0.34
PKP3-201ENST00000331563 SLCO1C1Q9NYB5 712 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 IL17CQ9P0M4 197 aa17.16■□□□□ 0.34
PKP3-201ENST00000331563 ZNF282Q9UDV7 671 aaPredicted RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms