RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 PLEKHN1Q494U1 663 aaPredicted RBP7.28□□□□□ -1.24
CDC42-201ENST00000315554 PRR30Q53SZ7 412 aaPredicted RBP7.28□□□□□ -1.24
CDC42-201ENST00000315554 FHL5Q5TD97 284 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 SLC6A19Q695T7 634 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 SPINK14Q6IE38 97 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 OGFOD2Q6N063 350 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 TUBA3EQ6PEY2 450 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 PAOXQ6QHF9 649 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 SLC29A4Q7RTT9 530 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 SZRD1Q7Z422 152 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 R3HCC1LQ7Z5L2 792 aaKnown RBP7.28□□□□□ -1.24
CDC42-201ENST00000315554 SPATA19Q7Z5L4 167 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 ANKRD46Q86W74 232 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 PRR22Q8IZ63 422 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 CLECL1Q8IZS7 167 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 ZNF615Q8N8J6 731 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 OR9I1Q8NGQ6 314 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 CEP70Q8NHQ1 597 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 C16orf52Q8NHV5 167 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 FBXO30Q8TB52 745 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 ITFG2Q969R8 447 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 CTHRC1Q96CG8 243 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 OTUB1Q96FW1 271 aaPredicted RBP7.28□□□□□ -1.24
CDC42-201ENST00000315554 SIGLEC12Q96PQ1 595 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 LMF1Q96S06 567 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 DUSP26Q9BV47 211 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 ITPAQ9BY32 194 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 WWTR1Q9GZV5 400 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 EQTNQ9NQ60 294 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 TCF7L2Q9NQB0 619 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 KLHL1Q9NR64 748 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 TAS2R7Q9NYW3 318 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 MYOTQ9UBF9 498 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 ZNF639Q9UID6 485 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 GPR45Q9Y5Y3 372 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 FAM208BQ5VWN6 2430 aa7.28□□□□□ -1.24
CDC42-201ENST00000315554 C2orf92A0A1B0GVN3 265 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 A0A1W2PRB8 838 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 OR5H15A6NDH6 313 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 G3V3Y1 287 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 FCHO1O14526 889 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 CFLARO15519 480 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 TBX19O60806 448 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 OR6B1O95007 311 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 TGDSO95455 350 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 NADKO95544 446 aaPredicted RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 CPSF4O95639 269 aaKnown RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 CD1EP15812 388 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 GPX3P22352 226 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 RPL3P39023 403 aaKnown RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 EMDP50402 254 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 SSR4P51571 173 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 PRKAG1P54619 331 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 CORO7P57737 925 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 PHC1P78364 1004 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ZNF155Q12901 538 aaPredicted RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 KLRB1Q12918 225 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 OR1C1Q15619 314 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 FAM174BQ3ZCQ3 159 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 SPANXN4Q5MJ08 99 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 HLA-DQA1Q5Y7H0 255 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 IGFL2Q6UWQ7 119 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 IL20RBQ6UXL0 311 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 SAMD14Q8IZD0 417 aaPredicted RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 CLEC4FQ8N1N0 589 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ZNF843Q8N446 348 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 TMEM156Q8N614 296 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 C7orf57Q8NEG2 295 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 OR7G1Q8NGA0 311 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 OR5L2Q8NGL0 311 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 OR5M3Q8NGP4 307 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ZFP28Q8NHY6 868 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ZNF675Q8TD23 568 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ASB15Q8WXK1 588 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 TM9SF4Q92544 642 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 COQ8BQ96D53 544 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 MTERF3Q96E29 417 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ELP4Q96EB1 424 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ZBED6CLQ96FA7 236 aaPredicted RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 RILPQ96NA2 401 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 RASL10BQ96S79 203 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 PRPF18Q99633 342 aaKnown RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 UTP23Q9BRU9 249 aaKnown RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 YIPF4Q9BSR8 244 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 TMEM120AQ9BXJ8 343 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 NXF5Q9H1B4 397 aaKnown RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 RABEP2Q9H5N1 569 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 DDX18Q9NVP1 670 aaKnown RBP7.27□□□□□ -1.25
CDC42-201ENST00000315554 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.27□□□□□ -1.25
CDC42-201ENST00000315554 ABI3Q9P2A4 366 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 ERVK-11Q9UQG0 969 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 PCDHGB7Q9Y5F8 929 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 SNX8Q9Y5X2 465 aa7.27□□□□□ -1.25
CDC42-201ENST00000315554 PYCARD-AS1I3L0S3 204 aa7.26□□□□□ -1.25
CDC42-201ENST00000315554 UPK1AO00322 258 aa7.26□□□□□ -1.25
CDC42-201ENST00000315554 PRAMEF2O60811 474 aa7.26□□□□□ -1.25
CDC42-201ENST00000315554 TROVE2P10155 538 aaKnown RBP eCLIP7.26□□□□□ -1.25
CDC42-201ENST00000315554 IDO1P14902 403 aa7.26□□□□□ -1.25
CDC42-201ENST00000315554 NCF2P19878 526 aaPredicted RBP7.26□□□□□ -1.25
CDC42-201ENST00000315554 S100A3P33764 101 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms