RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 NRROSQ86YC3 692 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 PTP4A1Q93096 173 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 SORBS1Q9BX66 1292 aaKnown RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 HCAR1Q9BXC0 346 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 GLIPR2Q9H4G4 154 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 MS4A12Q9NXJ0 267 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 TAS2R9Q9NYW1 312 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 ELF5Q9UKW6 265 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-201ENST00000315544 U3KQV3 271 aa7.33□□□□□ -1.24
CNOT4-201ENST00000315544 A8MU76 341 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 BDKRB1P46663 353 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 RFX3P48380 749 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 FRRS1Q6ZNA5 592 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 C9orf62Q8N4C0 152 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SCAIQ8N9R8 606 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 FAM98AQ8NCA5 519 aaKnown RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 TMEM163Q8TC26 289 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 RGP1Q92546 391 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 MAPKAP1Q9BPZ7 522 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 C6orf106Q9H6K1 298 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SPHK2Q9NRA0 654 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SERTAD3Q9UJW9 196 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 ACSL6Q9UKU0 697 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 MAU2Q9Y6X3 613 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 STX7O15400 261 aaKnown RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 KIAA0513O60268 411 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 KAT7O95251 611 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 POP4O95707 220 aaKnown RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 ABHD16AO95870 558 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 C6orf47O95873 294 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 DRD5P21918 477 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 EVX1P49640 407 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 PNLIPRP1P54315 467 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 RAD23AP54725 363 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SLC12A2P55011 1212 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 TANGO2Q6ICL3 276 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 KRT80Q6KB66 452 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 LYPD8Q6UX82 237 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 Q6ZVL8 140 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 NRARPQ7Z6K4 114 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 MRGPRFQ96AM1 343 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 LOXL4Q96JB6 756 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 TSSK3Q96PN8 268 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 PCED1AQ9H1Q7 454 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 NPDC1Q9NQX5 325 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 IRAK4Q9NWZ3 460 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 TEX10Q9NXF1 929 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 RPS6KA6Q9UK32 745 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 A0A087WUU8 490 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 WWP2O00308 870 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SYT5O00445 386 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 POLR1CO15160 346 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 ANXA8P13928 327 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 CALCRP30988 508 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 TMEM115Q12893 351 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 RPA4Q13156 261 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SIM2Q14190 667 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 RPS26P11Q5JNZ5 115 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 TMEM255AQ5JRV8 349 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SLC30A8Q8IWU4 369 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 FBXL6Q8N531 539 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 OR11H4Q8NGC9 324 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SFXN5Q8TD22 340 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 SLC7A6Q92536 515 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 IRF7Q92985 503 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 MS4A6EQ96DS6 147 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 MAP6Q96JE9 813 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 TREX2Q9BQ50 279 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 RPP25Q9BUL9 199 aaKnown RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 YARS2Q9Y2Z4 477 aaKnown RBP7.32□□□□□ -1.24
CNOT4-201ENST00000315544 WDR87Q6ZQQ6 2873 aa7.32□□□□□ -1.24
CNOT4-201ENST00000315544 PRRC2BQ5JSZ5 2229 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 TRDV1A0A1B0GX56 115 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PROM1O43490 865 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 EML2O95834 649 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 GUCA1CO95843 209 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PKLRP30613 574 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 ZNF85Q03923 595 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PDGFRLQ15198 375 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 CPSF6Q16630 551 aaKnown RBP eCLIP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 TIGD6Q17RP2 521 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 FAM209AQ5JX71 171 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 TMIGD1Q6UXZ0 262 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 WDFY1Q8IWB7 410 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 CELF5Q8N6W0 485 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 PSD4Q8NDX1 1056 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 SETD9Q8NE22 299 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 BRIX1Q8TDN6 353 aaKnown RBP7.31□□□□□ -1.24
CNOT4-201ENST00000315544 GPR151Q8TDV0 419 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 SLC30A2Q9BRI3 323 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 TBCDQ9BTW9 1192 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 BTBD1Q9H0C5 482 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 KLHL31Q9H511 634 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 CLDND1Q9NY35 253 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 ITM2BQ9Y287 266 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 A0A1W2PR48 441 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 ANKRD34BA5PLL1 514 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 SHOXO15266 292 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 IL7P13232 177 aa7.31□□□□□ -1.24
CNOT4-201ENST00000315544 ALDH4A1P30038 563 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms