RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 NUP43Q8NFH3 380 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 PPA2Q9H2U2 334 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ERVK13-1Q9NX77 482 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 MROH1Q8NDA8 1641 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 OR51F1A6NGY5 319 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 SNHG28P0DPA3 235 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 TIA1P31483 386 aaKnown RBP eCLIP14.79□□□□□ -0.046e-7■■□□□ 11.4
HCFC1-201ENST00000310441 ASPGQ86U10 573 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 DCAF4L2Q8NA75 395 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 SLC35B2Q8TB61 432 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ADAMTS19Q8TE59 1207 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 FBXL20Q96IG2 436 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 BCAS3Q9H6U6 928 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 GOSR2O14653 212 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 PLCXD2Q0VAA5 305 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 TREML2Q5T2D2 321 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ZFAND4Q86XD8 727 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 RELL1Q8IUW5 271 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ATG2BQ96BY7 2078 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 F5H5P2 479 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 ALDOBP05062 364 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 PTPN6P29350 595 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 HTR3AP46098 478 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 CD97P48960 835 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 DHPSP49366 369 aaPredicted RBP14.79□□□□□ -0.04
HCFC1-201ENST00000310441 SLAMF1Q13291 335 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 EIF2B1Q14232 305 aaKnown RBP14.79□□□□□ -0.04
HCFC1-201ENST00000310441 SPANXN4Q5MJ08 99 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 IRF7Q92985 503 aa14.79□□□□□ -0.04
HCFC1-201ENST00000310441 DENRO43583 198 aaKnown RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 PTH2RP49190 550 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 DAP3P51398 398 aaKnown RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 CDH15P55291 814 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 TAS2R30P59541 319 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 FGL2Q14314 439 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 SLC35F1Q5T1Q4 408 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 OR52E8Q6IFG1 317 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 RBM12BQ8IXT5 1001 aaKnown RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 C1orf74Q96LT6 269 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 CACNG6Q9BXT2 260 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF436Q9C0F3 470 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 OR8D2Q9GZM6 311 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF225Q9UK10 706 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 PHLPP1O60346 1717 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 CD79BP40259 229 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ARL5BQ96KC2 179 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 P2RY13Q9BPV8 354 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ACTRT3Q9BYD9 372 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF696Q9H7X3 374 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 APC2O95996 2303 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 PNMTP11086 282 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 GABRA3P34903 492 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 GALNT2Q10471 571 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 NCBP2-AS2Q69YL0 99 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 OTOP2Q7RTS6 562 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 SGTBQ96EQ0 304 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF587Q96SQ5 575 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 COL3A1P02461 1466 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF736B4DX44 427 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 TP53P04637 393 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 MRPL3P09001 348 aaKnown RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 BPIP17213 487 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 OR5L1Q8NGL2 311 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 OR5AK2Q8NH90 309 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 MMABQ96EY8 250 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 FBRSQ9HAH7 460 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 UGT2B7P16662 529 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 SPATC1Q76KD6 591 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 FNDC9Q8TBE3 224 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 KIAA1217Q5T5P2 1943 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 TTC24A2A3L6 582 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 CDHR4A6H8M9 788 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 C11orf98E9PRG8 122 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 RAB3BP20337 219 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 LRIT3Q3SXY7 679 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF678Q5SXM1 525 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 ANKRD54Q6NXT1 300 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 OR8K3Q8NH51 312 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 COQ4Q9Y3A0 265 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 A6NIZ1 184 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 LOC730098B7Z3J9 87 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 OIP5O43482 229 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 AMY2AP04746 511 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 CD63P08962 238 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 RAP1BP61224 184 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 RAP1AP62834 184 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 DLX2Q07687 328 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 EIF4HQ15056 248 aaKnown RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 MGLLQ99685 303 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 TP63Q9H3D4 680 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 TCEAL2Q9H3H9 227 aaPredicted RBP14.78□□□□□ -0.04
HCFC1-201ENST00000310441 DZANK1Q9NVP4 752 aa14.78□□□□□ -0.04
HCFC1-201ENST00000310441 SULT1B1O43704 296 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 TOXO94900 526 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 DDCP20711 480 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 PRSS3P35030 304 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 PBX2P40425 430 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 RCAN2Q14206 197 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF681Q96N22 645 aa14.77□□□□□ -0.04
HCFC1-201ENST00000310441 ZFC3H1O60293 1989 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms