RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 TLR1Q15399 786 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 NNATQ16517 81 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 MEP1AQ16819 746 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 SPDYE7PQ495Y7 208 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 GKAP1Q5VSY0 366 aaPredicted RBP11.93□□□□□ -0.5
APTX-201ENST00000309615 PCSK4Q6UW60 755 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 DNAJC14Q6Y2X3 702 aaPredicted RBP11.93□□□□□ -0.5
APTX-201ENST00000309615 TMEM64Q6YI46 380 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 MSANTD1Q6ZTZ1 278 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 BEST3Q8N1M1 668 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ZNF441Q8N8Z8 693 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 NUP43Q8NFH3 380 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 GOT1L1Q8NHS2 421 aaPredicted RBP11.93□□□□□ -0.5
APTX-201ENST00000309615 GIMAP5Q96F15 307 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ZNF354BQ96LW1 612 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 VSTM2LQ96N03 204 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 MS4A4EQ96PG1 132 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ITPAQ9BY32 194 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 RMND5AQ9H871 391 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 FOLH1BQ9HBA9 442 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ZCCHC3Q9NUD5 404 aaKnown RBP11.93□□□□□ -0.5
APTX-201ENST00000309615 MRGBPQ9NV56 204 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 PRODH2Q9UF12 536 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 CFL2Q9Y281 166 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 A0A1W2PP18 115 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ERVH48-1M5A8F1 160 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ZNF354AO60765 605 aaPredicted RBP11.93□□□□□ -0.5
APTX-201ENST00000309615 F10P00742 488 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 C1QCP02747 245 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 CT45A8P0DMV1 189 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 CT45A9P0DMV2 189 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 CORO7P57737 925 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 LRRC74AQ0VAA2 488 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ZNF155Q12901 538 aaPredicted RBP11.93□□□□□ -0.5
APTX-201ENST00000309615 MFAP5Q13361 173 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 TP53BP2Q13625 1128 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 CT45A2Q5DJT8 189 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 PAGE3Q5JUK9 113 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 C6orf10Q5SRN2 563 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 HLA-DQA1Q5Y7H0 255 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 LGI4Q8N135 537 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 GTF2H4Q92759 462 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ITCHQ96J02 903 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 NXF5Q9H1B4 397 aaKnown RBP11.93□□□□□ -0.5
APTX-201ENST00000309615 MYLK2Q9H1R3 596 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 ANKRD10Q9NXR5 420 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 PLA2G3Q9NZ20 509 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 TP53TG5Q9Y2B4 290 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 CAPN7Q9Y6W3 813 aa11.93□□□□□ -0.5
APTX-201ENST00000309615 CACNA1BQ00975 2339 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 ERN1O75460 977 aaKnown RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 WDPCPO95876 746 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 HMGN2P05204 90 aaKnown RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 SNRPB2P08579 225 aaKnown RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 PTPN6P29350 595 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 CD97P48960 835 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 NR0B1P51843 470 aaKnown RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 ZNF468Q5VIY5 522 aaPredicted RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 IGFL2Q6UWQ7 119 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 NPSR1Q6W5P4 371 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 ZNF621Q6ZSS3 439 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 OR56A1Q8NGH5 318 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 FBXO30Q8TB52 745 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 SFXN5Q8TD22 340 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 C16orf58Q96GQ5 468 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 BTBD9Q96Q07 612 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 LMF1Q96S06 567 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 RASL10BQ96S79 203 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 YIPF4Q9BSR8 244 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 CCDC106Q9BWC9 280 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 ADNPQ9H2P0 1102 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 ZNF71Q9NQZ8 489 aaPredicted RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 GPATCH2Q9NW75 528 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 SLAMF8Q9P0V8 285 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 TUBD1Q9UJT1 453 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 LHX6Q9UPM6 363 aa11.92□□□□□ -0.5
APTX-201ENST00000309615 GPR55Q9Y2T6 319 aaPredicted RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 YARS2Q9Y2Z4 477 aaKnown RBP11.92□□□□□ -0.5
APTX-201ENST00000309615 RNF103-CHMP3A0A140T963 221 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 DYTNA2CJ06 578 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 SLC22A2O15244 555 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 NADKO95544 446 aaPredicted RBP11.91□□□□□ -0.5
APTX-201ENST00000309615 UQCRC2P22695 453 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 ADSLP30566 484 aaPredicted RBP11.91□□□□□ -0.5
APTX-201ENST00000309615 PPICP45877 212 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 PSG6Q00889 435 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 LY6DQ14210 128 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 LASP1Q14847 261 aaKnown RBP11.91□□□□□ -0.5
APTX-201ENST00000309615 GTDC1Q4AE62 458 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 PIGGQ5H8A4 983 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 MFSD12Q6NUT3 480 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 RETREG3Q86VR2 466 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 SNX32Q86XE0 403 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 TREML1Q86YW5 311 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 ANKS4BQ8N8V4 417 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 C17orf47Q8NEP4 570 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 C9orf43Q8TAL5 461 aaPredicted RBP11.91□□□□□ -0.5
APTX-201ENST00000309615 BCAS4Q8TDM0 211 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 TSPEARQ8WU66 669 aa11.91□□□□□ -0.5
APTX-201ENST00000309615 TP53INP1Q96A56 240 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms