RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 OVCA2Q8WZ82 227 aa12□□□□□ -0.49
RETREG3-201ENST00000309428 MAPKAP1Q9BPZ7 522 aa12□□□□□ -0.49
RETREG3-201ENST00000309428 AHSPQ9NZD4 102 aa12□□□□□ -0.49
RETREG3-201ENST00000309428 NDRG4Q9ULP0 352 aaKnown RBP12□□□□□ -0.49
RETREG3-201ENST00000309428 ABHD14A-ACY1A0A1B0GW23 586 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 DSCR3O14972 297 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 MPZL2O60487 215 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 TP53P04637 393 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 SAGP10523 405 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 ACVR1BP36896 505 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 VSX2P58304 361 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 SELENOWP63302 87 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 SGCGQ13326 291 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 KIAA0040Q15053 153 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 MICAQ29983 383 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 VITQ6UXI7 678 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 HDDC3Q8N4P3 179 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 ASB12Q8WXK4 309 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 REPS1Q96D71 796 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 SLC23A2Q9UGH3 650 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 STUB1Q9UNE7 303 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 BAIAP2Q9UQB8 552 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 GATBO75879 557 aaKnown RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 DNASE1P24855 282 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 LSM11P83369 360 aaKnown RBP eCLIP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 KCNC4Q03721 635 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 BTN1A1Q13410 526 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 GBX1Q14549 363 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 KIAA1324Q6UXG2 1013 aaKnown RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 Q6ZNB5 142 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 LINGO2Q7L985 606 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 OR8K5Q8NH50 307 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 CHFRQ96EP1 664 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 HRASLS5Q96KN8 279 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 SLC6A16Q9GZN6 736 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 RC3H2Q9HBD1 1191 aaKnown RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 TRBV4-1A0A0J9YWV2 114 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 FAM183AA6NL82 134 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 FABP7O15540 132 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 ERI3O43414 337 aaKnown RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 CD3GP09693 182 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 OR12D1P0DN82 309 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 TIA1P31483 386 aaKnown RBP eCLIP11.99□□□□□ -0.493e-6■□□□□ 10.9
RETREG3-201ENST00000309428 CLDN2P57739 230 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 RGS8P57771 180 aaPredicted RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 TSPAN5P62079 268 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 FAPQ12884 760 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 LARS2Q15031 903 aaKnown RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 GALNT13Q8IUC8 556 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 TOMM5Q8N4H5 51 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 DEFB119Q8N690 84 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 DENND6BQ8NEG7 585 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 OR4E2Q8NGC2 313 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 SLC5A11Q8WWX8 675 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 TRMT2BQ96GJ1 504 aaKnown RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 SECISBP2Q96T21 854 aaKnown RBP11.99□□□□□ -0.49
RETREG3-201ENST00000309428 CNIH4Q9P003 139 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 CCL27Q9Y4X3 112 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 KNTC1P50748 2209 aa11.99□□□□□ -0.49
RETREG3-201ENST00000309428 PEPDP12955 493 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 BMP7P18075 431 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 CD9P21926 228 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 HNMTP50135 292 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 AP1S2P56377 157 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 ZNF91Q05481 1191 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 HYAL2Q12891 473 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 DUSP7Q16829 419 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 PJA1Q8NG27 643 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 OR2T35Q8NGX2 323 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 CEP76Q8TAP6 659 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 ARRDC3Q96B67 414 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 NDUFAF4Q9P032 175 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 RABL2AQ9UBK7 228 aaPredicted RBP11.98□□□□□ -0.49
RETREG3-201ENST00000309428 A0A1W2PRG6 482 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 SCAMP2O15127 329 aaKnown RBP11.98□□□□□ -0.49
RETREG3-201ENST00000309428 GREM1O60565 184 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 PROS1P07225 676 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 STOMP27105 288 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 ZNF763Q0D2J5 394 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 FAM209AQ5JX71 171 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 AMER3Q8N944 861 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 GALNT11Q8NCW6 608 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 CCDC115Q96NT0 180 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 QRFPRQ96P65 431 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 SPATA9Q9BWV2 254 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 SLA2Q9H6Q3 261 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 HS3ST2Q9Y278 367 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 IRAK3Q9Y616 596 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 ZDBF2Q9HCK1 2354 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 LAMA1P25391 3075 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 NCOR1O75376 2440 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 FXYD6-FXYD2A0A087WZ82 144 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 HEPACAM2A8MVW5 462 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 J3QLW9 94 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 APOC3P02656 99 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 ZNF19P17023 458 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 ZNF234Q14588 700 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 NTRK2Q16620 822 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 ODF4Q2M2E3 257 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms