RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 KALRNO60229 2985 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 SPTA1P02549 2419 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 EMC8O43402 210 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 DPM1O60762 260 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 SOAT1P35610 550 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 SSR4P51571 173 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 OC90Q02509 493 aaPredicted RBP20.68■□□□□ 0.9
HOXD4-201ENST00000306324 ZNF155Q12901 538 aaPredicted RBP20.68■□□□□ 0.9
HOXD4-201ENST00000306324 SPDYE7PQ495Y7 208 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 TIGD2Q4W5G0 525 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 AGKQ53H12 422 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 HPS6Q86YV9 775 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 NUP43Q8NFH3 380 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 ADIPOR1Q96A54 375 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 UTP23Q9BRU9 249 aaKnown RBP20.68■□□□□ 0.9
HOXD4-201ENST00000306324 MFRPQ9BY79 579 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 CXorf36Q9H7Y0 433 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 FOLH1BQ9HBA9 442 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 EQTNQ9NQ60 294 aa20.68■□□□□ 0.9
HOXD4-201ENST00000306324 ZCCHC3Q9NUD5 404 aaKnown RBP20.68■□□□□ 0.9
HOXD4-201ENST00000306324 OR5H15A6NDH6 313 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 IFI6P09912 130 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 CASRP41180 1078 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 KCNK10P57789 538 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 PRR5P85299 388 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 PSMA8Q8TAA3 256 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 SLC22A8Q8TCC7 542 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 ASB15Q8WXK1 588 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 HAS2Q92819 552 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 VPS33AQ96AX1 596 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 FAM120BQ96EK7 910 aaKnown RBP20.67■□□□□ 0.9
HOXD4-201ENST00000306324 BBC3Q96PG8 261 aaPredicted RBP20.67■□□□□ 0.9
HOXD4-201ENST00000306324 RNF32Q9H0A6 362 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.67■□□□□ 0.9
HOXD4-201ENST00000306324 ZNF385DQ9H6B1 395 aa20.67■□□□□ 0.9
HOXD4-201ENST00000306324 NR5A2O00482 541 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 ZNF354AO60765 605 aaPredicted RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 ERN1O75460 977 aaKnown RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 CD96P40200 585 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 CCT3P49368 545 aaKnown RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 TUBA3CQ13748 450 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 PIGGQ5H8A4 983 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 ZNF468Q5VIY5 522 aaPredicted RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 TUBA3EQ6PEY2 450 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 PTRH1Q86Y79 214 aaKnown RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 FUNDC1Q8IVP5 155 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 RBMXL3Q8N7X1 1067 aaKnown RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 ZNF441Q8N8Z8 693 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 LSM14AQ8ND56 463 aaKnown RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 CATSPER1Q8NEC5 780 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 OR5AK3PQ8NH89 298 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 SLC39A7Q92504 469 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 TP53INP1Q96A56 240 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 LCORQ96JN0 433 aaPredicted RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 VSTM2LQ96N03 204 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 NXF5Q9H1B4 397 aaKnown RBP20.66■□□□□ 0.9
HOXD4-201ENST00000306324 BTNL2Q9UIR0 455 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 ADAM21Q9UKJ8 722 aa20.66■□□□□ 0.9
HOXD4-201ENST00000306324 PRRC2CQ9Y520 2896 aaKnown RBP20.65■□□□□ 0.9
HOXD4-201ENST00000306324 PSMG1O95456 288 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 SOX3P41225 446 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 CYB561P49447 251 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 CORO7P57737 925 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 TP53BP2Q13625 1128 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 RCAN2Q14206 197 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 BLOC1S3Q6QNY0 202 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 TMEM64Q6YI46 380 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 WDR53Q7Z5U6 358 aaPredicted RBP20.65■□□□□ 0.9
HOXD4-201ENST00000306324 TAGAPQ8N103 731 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 TEX19Q8NA77 164 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 C17orf47Q8NEP4 570 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 CCDC115Q96NT0 180 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 MS4A4EQ96PG1 132 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 PANX1Q96RD7 426 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 NTMQ9P121 344 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 LRFN1Q9P244 771 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 ERVK-11Q9UQG0 969 aa20.65■□□□□ 0.9
HOXD4-201ENST00000306324 CCDC154A6NI56 674 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 A8MVJ9 347 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 SNX3O60493 162 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 OR6B1O95007 311 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 TRHRP34981 398 aaPredicted RBP20.64■□□□□ 0.89
HOXD4-201ENST00000306324 PPICP45877 212 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 HLCSP50747 726 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 NRG3P56975 720 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 DCAF7P61962 342 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 LRRC74AQ0VAA2 488 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 MAPKAPK3Q16644 382 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 NADK2Q4G0N4 442 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 OPN5Q6U736 354 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 IL20RBQ6UXL0 311 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 CLEC4FQ8N1N0 589 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 SPDL1Q96EA4 605 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 SIGLEC12Q96PQ1 595 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 INPP5KQ9BT40 448 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 EPN3Q9H201 632 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 RMND5AQ9H871 391 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 TMEM45AQ9NWC5 275 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 HPF1Q9NWY4 346 aa20.64■□□□□ 0.89
HOXD4-201ENST00000306324 RALYQ9UKM9 306 aaKnown RBP20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms