RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 KIAA1191Q96A73 305 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 OR4K3Q96R72 315 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SLC22A12Q96S37 553 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 ELF4Q99607 663 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 MVB12BQ9H7P6 319 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TAS2R7Q9NYW3 318 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 FNIP2Q9P278 1114 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM5Q9Y2B1 443 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 RHBDD3Q9Y3P4 386 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 XRN1Q8IZH2 1706 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TEX13CA0A0J9YWL9 993 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SHOXO15266 292 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 AQP9O43315 295 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 MAGEA2P43356 314 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SPEM2Q0P670 501 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 GPALPP1Q8IXQ4 340 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 GJD3Q8N144 294 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 CENPSQ8N2Z9 138 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 DDX1Q92499 740 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 IMP4Q96G21 291 aaKnown RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 RTP3Q9BQQ7 232 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 PFDN2Q9UHV9 154 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 UBR1Q8IWV7 1749 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 COL2A1P02458 1487 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 FAM166BA8MTA8 275 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 MPZL2O60487 215 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 FOXD2O60548 495 aaPredicted RBP7.41□□□□□ -1.22
SCN9A-201ENST00000303354 SOCS5O75159 536 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 PSMB10P40306 273 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 PITPNAQ00169 270 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 MOB3CQ70IA8 216 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TOMM5Q8N4H5 51 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM109Q9BVC6 243 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 HSFX1Q9UBD0 423 aa7.41□□□□□ -1.22
SCN9A-201ENST00000303354 KDM4EB2RXH2 506 aaPredicted RBP7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ACOX3O15254 700 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 S1PR4O95977 384 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 GSTT2BP0CG30 244 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 CPMP14384 443 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 CTSCP53634 463 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 WDR4P57081 412 aaKnown RBP7.4□□□□□ -1.22
SCN9A-201ENST00000303354 TFF2Q03403 129 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ABHD18Q0P651 414 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 RSU1Q15404 277 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 LIPKQ5VXJ0 399 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 KCTD7Q96MP8 289 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 KLF16Q9BXK1 252 aaPredicted RBP7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ZBTB26Q9HCK0 441 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 KLHL9Q9P2J3 617 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 LTBP3Q9NS15 1303 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 GPIP06744 558 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 GTF2F2P13984 249 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 CD40LGP29965 261 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ZFP69Q49AA0 526 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 GTDC1Q4AE62 458 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ALG10BQ5I7T1 473 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 DNTTIP1Q9H147 329 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 CUEDC1Q9NWM3 386 aaPredicted RBP7.4□□□□□ -1.22
SCN9A-201ENST00000303354 C2orf42Q9NWW7 574 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 A0A0U1RQK1 487 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 PLOD2O00469 737 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 BDH1Q02338 343 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 TAP2Q03519 686 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 LIN52Q52LA3 116 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 UNC50Q53HI1 259 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 LIPJQ5W064 366 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 HAGHLQ6PII5 290 aaPredicted RBP7.4□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM184AQ6ZMB5 413 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ARHGAP22Q7Z5H3 698 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 TMPRSS12Q86WS5 348 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 OR56A3Q8NH54 315 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 HDHD5Q9BXW7 423 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ACTR6Q9GZN1 396 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 A6NIN4 97 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 NUAK1O60285 661 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 METTL2BQ6P1Q9 378 aaKnown RBP7.4□□□□□ -1.22
SCN9A-201ENST00000303354 HS6ST2Q96MM7 605 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 TEX264Q9Y6I9 313 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 COL14A1Q05707 1796 aaKnown RBP7.4□□□□□ -1.22
SCN9A-201ENST00000303354 PRSS51A0A1B0GVH4 220 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 PTP4A2Q12974 167 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 DAG1Q14118 895 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 PIP5KL1Q5T9C9 394 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 AWAT2Q6E213 333 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 MFSD6LQ8IWD5 586 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 SLC5A8Q8N695 610 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 HORMAD2Q8N7B1 307 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 CCDC107Q8WV48 283 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 TMEM80Q96HE8 168 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 SLC2A13Q96QE2 648 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 MUTYHQ9UIF7 546 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 ADAMTS6Q9UKP5 1117 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 PCDHGA2Q9Y5H1 932 aa7.4□□□□□ -1.22
SCN9A-201ENST00000303354 OR6C70A6NIJ9 312 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 TEX46H3BTG2 121 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 M0R036 132 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 SULT2B1O00204 365 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 RPL5P46777 297 aaKnown RBP7.4□□□□□ -1.23
SCN9A-201ENST00000303354 GSTM4Q03013 218 aa7.4□□□□□ -1.23
SCN9A-201ENST00000303354 HNRNPA0Q13151 305 aaKnown RBP7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms