RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 NDOR1Q9UHB4 597 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 NOX1Q9Y5S8 564 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 ATG2BQ96BY7 2078 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 CHD9Q3L8U1 2897 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 SZT2Q5T011 3432 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 LALBAP00709 142 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 RB1P06400 928 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 CLTBP09497 229 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 ACP5P13686 325 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 ZNF234Q14588 700 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 LAPTM4BQ86VI4 370 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 VRK2Q86Y07 508 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 MORN4Q8NDC4 146 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 POF1BQ8WVV4 589 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 FAM46AQ96IP4 442 aaKnown RBP22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 MARK1Q9P0L2 795 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 ACAD8Q9UKU7 415 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 TRAPPC4Q9Y296 219 aa22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 MRPS23Q9Y3D9 190 aaKnown RBP22.98■■□□□ 1.27
SPTSSA-201ENST00000298130 A0A087WUU8 490 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 EPHA5P54756 1037 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 HYAL2Q12891 473 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 HNRNPA1L2Q32P51 320 aaKnown RBP22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 ZFP69Q49AA0 526 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 C18orf63Q68DL7 685 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 OR4C11Q6IEV9 310 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 DTX3Q8N9I9 347 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 OR4F15Q8NGB8 312 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 MENTQ9BUN1 341 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 RANGRFQ9HD47 186 aaPredicted RBP22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 ITGB1BP2Q9UKP3 347 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 GPR34Q9UPC5 381 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 KCNK6Q9Y257 313 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 REV3LO60673 3130 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 MYL12AP19105 171 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 ENDOUP21128 410 aaKnown RBP22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 APEX1P27695 318 aaKnown RBP22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 RAB8AP61006 207 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 CSNK1G2P78368 415 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 KHDRBS1Q07666 443 aaKnown RBP eCLIP22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 OCLNQ16625 522 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 FAM46CQ5VWP2 391 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 ARSGQ96EG1 525 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 ZNF514Q96K75 400 aaPredicted RBP22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 HDHD5Q9BXW7 423 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 SAP130Q9H0E3 1048 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 SYNPO2LQ9H987 977 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 TBC1D17Q9HA65 648 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 TESQ9UGI8 421 aaKnown RBP22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 ATG4BQ9Y4P1 393 aa22.97■■□□□ 1.27
SPTSSA-201ENST00000298130 DVL2O14641 736 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 P2RY2P41231 377 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 AVPR1BP47901 424 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 FABP5Q01469 135 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 PDZK1Q5T2W1 519 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 SLC30A6Q6NXT4 461 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 FAM26EQ8N5C1 309 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 ZNF557Q8N988 423 aaPredicted RBP22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 ATP6V1C2Q8NEY4 427 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 TMED9Q9BVK6 235 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 POLDIP3Q9BY77 421 aaKnown RBP22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 SLC35C2Q9NQQ7 365 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 MBNL1Q9NR56 388 aaKnown RBP22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 SCN3AQ9NY46 2000 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 MOSPD1Q9UJG1 213 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 DIMT1Q9UNQ2 313 aaKnown RBP22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 A0A1W2PRQ8 180 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 OR52A4PA6NMU1 304 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 PCDH8O95206 1070 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 PPP2R1BP30154 601 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 CD83Q01151 205 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 C12orf66Q96MD2 445 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 KATNB1Q9BVA0 655 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 CXXC1Q9P0U4 656 aaPredicted RBP22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 SLC9A8Q9Y2E8 581 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 TRPM6Q9BX84 2022 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 COL4A3Q01955 1670 aa22.96■■□□□ 1.27
SPTSSA-201ENST00000298130 REEP5Q00765 189 aa22.95■■□□□ 1.27
SPTSSA-201ENST00000298130 PAMR1Q6UXH9 720 aa22.95■■□□□ 1.27
SPTSSA-201ENST00000298130 CHAC2Q8WUX2 184 aa22.95■■□□□ 1.27
SPTSSA-201ENST00000298130 TOX2Q96NM4 488 aa22.95■■□□□ 1.27
SPTSSA-201ENST00000298130 NECTIN4Q96NY8 510 aa22.95■■□□□ 1.27
SPTSSA-201ENST00000298130 PCDHGB2Q9Y5G2 931 aa22.95■■□□□ 1.27
SPTSSA-201ENST00000298130 KIAA1549LQ6ZVL6 1849 aa22.95■■□□□ 1.27
SPTSSA-201ENST00000298130 SLC35F4A4IF30 521 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 ERI3O43414 337 aaKnown RBP22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 GAS1P54826 345 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 TAS2R41P59536 307 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 GLYR1Q49A26 553 aaPredicted RBP22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 KIAA1161Q6NSJ0 714 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 ERN2Q76MJ5 926 aaKnown RBP22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 LRRTM4Q86VH4 590 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 CNRIP1Q96F85 164 aaPredicted RBP22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 C6orf106Q9H6K1 298 aaPredicted RBP22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 PAQR5Q9NXK6 330 aaPredicted RBP22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 NARSO43776 548 aaKnown RBP22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 WNT4P56705 351 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 CLDN2P57739 230 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 CDK3Q00526 305 aa22.95■■□□□ 1.26
SPTSSA-201ENST00000298130 CHRNEQ04844 493 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms