RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 PTX3P26022 381 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 SLC9A3P48764 834 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 PSPHP78330 225 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ADGRD2Q7Z7M1 963 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 PLPP6Q8IY26 295 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 VWA5B2Q8N398 1253 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZNF671Q8TAW3 534 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 SLC7A6Q92536 515 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 IRF7Q92985 503 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 C12orf66Q96MD2 445 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 SDHCQ99643 169 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 SAP130Q9H0E3 1048 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 WSB2Q9NYS7 404 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 A0A1W2PS29 197 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 HMX3A6NHT5 357 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 SNTNA6NMZ2 147 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 DVL2O14641 736 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 MRPS14O60783 128 aaKnown RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZNF79Q15937 498 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 CDKN3Q16667 212 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 LIPIQ6XZB0 460 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZER1Q7Z7L7 766 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 VRK2Q86Y07 508 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 IQCF2Q8IXL9 164 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 OR52I1Q8NGK6 324 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 AP3S1Q92572 193 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 RNF31Q96EP0 1072 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 CCDC120Q96HB5 630 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 MED28Q9H204 178 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ADAP2Q9NPF8 381 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 MGAT4BQ9UQ53 548 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 MAU2Q9Y6X3 613 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 SCN10AQ9Y5Y9 1956 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 OR52A4PA6NMU1 304 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZAR1LA6NP61 321 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 HEPACAM2A8MVW5 462 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 I3L521 148 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 PSMD9O00233 223 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 NOS1APO75052 506 aaPredicted RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ADAP00813 363 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 HMGN2P05204 90 aaKnown RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 SLC35G4P0C7Q5 338 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 CBLP22681 906 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 GPLD1P80108 840 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 TCEAL5Q5H9L2 206 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 FAM205BPQ63HN1 556 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZNF783Q6ZMS7 281 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 PARS2Q7L3T8 475 aaKnown RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 CDH24Q86UP0 819 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 GPR32P1Q8NGA4 272 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 OR51A7Q8NH64 312 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 CHAC2Q8WUX2 184 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 TM9SF4Q92544 642 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 TIFAQ96CG3 184 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZCCHC2Q9C0B9 1178 aaKnown RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 PPIL3Q9H2H8 161 aaKnown RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 ELAC1Q9H777 363 aaKnown RBP12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 P2RX2Q9UBL9 471 aa12.58□□□□□ -0.4
TNFRSF21-201ENST00000296861 B4DXG7 233 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 PLPP1O14494 284 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 ALX3O95076 343 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 SRP9P49458 86 aaKnown RBP12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 CCNJQ5T5M9 372 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 PGBD2Q6P3X8 592 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 FAM92BQ6ZTR7 304 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 CCDC149Q6ZUS6 474 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 LRRTM4Q86VH4 590 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 AMZ2Q86W34 360 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 ANKK1Q8NFD2 765 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 BBS1Q8NFJ9 593 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 TDP1Q9NUW8 608 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 J3QLW9 94 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 ICMTO60725 284 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZNF19P17023 458 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 IL1RNP18510 177 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 RPL3P39023 403 aaKnown RBP12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 VIPR2P41587 438 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 CCR2P41597 374 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 SMSP52788 366 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 SAXO2Q658L1 398 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 TPGS2Q68CL5 300 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 SLC27A4Q6P1M0 643 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 ATCAYQ86WG3 371 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 NRMQ8IXM6 262 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 LRRC17Q8N6Y2 441 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 NUS1Q96E22 293 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 KLHL28Q9NXS3 571 aa12.57□□□□□ -0.4
TNFRSF21-201ENST00000296861 ZNF670-ZNF695F2Z2N8 137 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 RGS13O14921 159 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 NDUFS4O43181 175 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 LYRM1O43325 122 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 PAK4O96013 591 aaPredicted RBP12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 CD3GP09693 182 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 PRG2P13727 222 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 KELP23276 732 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 WNT4P56705 351 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 SYT14P1Q58G82 188 aa12.56□□□□□ -0.4
TNFRSF21-201ENST00000296861 FAM209AQ5JX71 171 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms