RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 APOC1P02654 83 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 PBX2P40425 430 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 HK3P52790 923 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 HMGN2P46Q86SG4 172 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 TOR3AQ9H497 397 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 CUTCQ9NTM9 273 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 ECHS1P30084 290 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 ATP6AP1Q15904 470 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 PSD4Q8NDX1 1056 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 SACM1LQ9NTJ5 587 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 A0A0X1KG70 313 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 SNNO75324 88 aaPredicted RBP16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 EXOC3L2Q2M3D2 409 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 ABCA11PQ4W5N1 156 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 METTL25Q8N6Q8 603 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 BTNL2Q9UIR0 455 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 GPR39O43194 453 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 INMTO95050 263 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 MAZP56270 477 aaKnown RBP16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 ACTC1P68032 377 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 ACTA1P68133 377 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 OR51G2Q8NGK0 314 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 ITPAQ9BY32 194 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 GRIP1Q9Y3R0 1128 aa16.79■□□□□ 0.28
CDC42EP3-201ENST00000295324 TRAPPC13A5PLN9 417 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 TPMTP51580 245 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 MADCAM1Q13477 382 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 TAZQ16635 292 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ARHGAP11AQ6P4F7 1023 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 RSPO2Q6UXX9 243 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMEM203Q969S6 136 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 SLC22A1O15245 554 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ACOX3O15254 700 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 PRKCAP17252 672 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 HIST1H1TP22492 207 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 MC3RP41968 323 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZFP69Q49AA0 526 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 OR9A2Q8NGT5 310 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 MAFAQ8NHW3 353 aaPredicted RBP16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 KCNN1Q92952 543 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 STOML2Q9UJZ1 356 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 SCGNO76038 276 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ICAM2P13598 275 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 PGAM2P15259 253 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 NDUFV2P19404 249 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 SCRN3Q0VDG4 424 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 TNFAIP8L3Q5GJ75 292 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ENPP6Q6UWR7 440 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 SHISA6Q6ZSJ9 500 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 PGBD5Q8N414 524 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 THAP4Q8WY91 577 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 TBC1D20Q96BZ9 403 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 DNAJA3Q96EY1 480 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 MYNNQ9NPC7 610 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF221Q9UK13 617 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 FMO6PO60774 539 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 SCRG1O75711 98 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 GJB3O75712 270 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZFAND5O76080 213 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 GLULP15104 373 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ODF4Q2M2E3 257 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ULK3Q6PHR2 472 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 FTMTQ8N4E7 242 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 HTRA1Q92743 480 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 FRMD6Q96NE9 622 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 CITED4Q96RK1 184 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 MYADMQ96S97 322 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 ERVK-19Q9WJR5 959 aa16.78■□□□□ 0.28
CDC42EP3-201ENST00000295324 CCNKO75909 580 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 SWI5Q1ZZU3 235 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 ARSJQ5FYB0 599 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 TMED9Q9BVK6 235 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 ULBP3Q9BZM4 244 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 IL37Q9NZH6 218 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 LRRC42Q9Y546 428 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 HEMK1Q9Y5R4 338 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 MYH10P35580 1976 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 CTSL3PQ5NE16 218 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 OGFOD2Q6N063 350 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF227Q86WZ6 799 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 GOLM1Q8NBJ4 401 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 DNAJA4Q8WW22 397 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 CCNL2Q96S94 520 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 CCM2LQ9NUG4 571 aaPredicted RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 EIF3KQ9UBQ5 218 aaKnown RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 ADAMTS6Q9UKP5 1117 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 PCDHGA3Q9Y5H0 932 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF878C9JN71 531 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 RNASET2O00584 256 aaKnown RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 ZNF43P17038 809 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 ERI1Q8IV48 349 aaKnown RBP16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 LIX1LQ8IVB5 337 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 LINC01599Q8WXQ3 324 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 MAGIXQ9H6Y5 334 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 BAIAP2Q9UQB8 552 aa16.77■□□□□ 0.28
CDC42EP3-201ENST00000295324 FTCDNL1E5RQL4 147 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 NOS1APO75052 506 aaPredicted RBP16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 HMBOX1Q6NT76 420 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 OPN5Q6U736 354 aa16.77■□□□□ 0.27
CDC42EP3-201ENST00000295324 IQCF2Q8IXL9 164 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms