RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 TSC22D3Q99576 134 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 WFDC6Q9BQY6 131 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ADNPQ9H2P0 1102 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 EPHA6Q9UF33 1036 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ADAMTS20P59510 1910 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 TRBV4-1A0A0J9YWV2 114 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 PLOD3O60568 738 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ABCB7O75027 752 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 LDB3O75112 727 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ZIC2O95409 532 aaPredicted RBP9.53□□□□□ -0.88
C9orf43-201ENST00000288462 LGI1O95970 557 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 HTR1AP08908 422 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ACP2P11117 423 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 JUNBP17275 347 aaPredicted RBP9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ELAVL4P26378 380 aaKnown RBP9.53□□□□□ -0.88
C9orf43-201ENST00000288462 MAPK10P53779 464 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 GFERP55789 205 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 CXCR4P61073 352 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 RPP38P78345 283 aaKnown RBP9.53□□□□□ -0.88
C9orf43-201ENST00000288462 MGAT2Q10469 447 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 INAVAQ3KP66 663 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ZBED5Q49AG3 693 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 NIPAL1Q6NVV3 410 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 DEF8Q6ZN54 512 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 C16orf62Q7Z3J2 963 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 TAGAPQ8N103 731 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 VANGL1Q8TAA9 524 aaPredicted RBP9.53□□□□□ -0.88
C9orf43-201ENST00000288462 CNIH3Q8TBE1 160 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 COL26A1Q96A83 441 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 CD180Q99467 661 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 NIPSNAP1Q9BPW8 284 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 ERVMER34-1Q9H9K5 563 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 NMNAT1Q9HAN9 279 aaPredicted RBP9.53□□□□□ -0.88
C9orf43-201ENST00000288462 MAT2BQ9NZL9 334 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 RHCGQ9UBD6 479 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 A4GNTQ9UNA3 340 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 PLCL2Q9UPR0 1127 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 SLC9A8Q9Y2E8 581 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 PCDHGA6Q9Y5G7 932 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 RNF215Q9Y6U7 377 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 COMMD3-BMI1R4GMX3 469 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 SCN2AQ99250 2005 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 NINQ8N4C6 2090 aa9.53□□□□□ -0.88
C9orf43-201ENST00000288462 KNL1Q8NG31 2342 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 FAM227AF5H4B4 570 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 M0R3H8 397 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 CHST10O43529 356 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 FOXS1O43638 330 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 OXSR1O95747 527 aaPredicted RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ANGPTL1O95841 491 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ALPPP05187 535 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 H1F0P07305 194 aaKnown RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 GSTT1P30711 240 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 HOXA6P31267 233 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 GGT2P36268 569 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 MLLT3P42568 568 aaPredicted RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ESRRGP62508 458 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 SKP1P63208 163 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PRICKLE4Q2TBC4 344 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 LAIR1Q6GTX8 287 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 DHRS4L2Q6PKH6 230 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 FRRS1Q6ZNA5 592 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 KCTD8Q6ZWB6 473 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 GPR141Q7Z602 305 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 B3GNT8Q7Z7M8 397 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 AQP11Q8NBQ7 271 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 SLC16A11Q8NCK7 471 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 SIMC1Q8NDZ2 872 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ADAMTS15Q8TE58 950 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ADAMTS18Q8TE60 1221 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 CDS1Q92903 461 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ARHGDIGQ99819 225 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 POLR1BQ9H9Y6 1135 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ENAMQ9NRM1 1142 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PAK1IP1Q9NWT1 392 aaPredicted RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ENOPH1Q9UHY7 261 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 CSNK1G3Q9Y6M4 447 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 GON4LQ3T8J9 2241 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PCDH15Q96QU1 1955 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 IGHV5-51A0A0C4DH38 117 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 CCDC163A0A0D9SF12 145 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 BLACEA4D250 179 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 H3BSA7 217 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 FAAHO00519 579 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 NME6O75414 186 aaPredicted RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 NSA2O95478 260 aaKnown RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 ADAP00813 363 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 RNH1P13489 461 aaKnown RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PRKAR1BP31321 381 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 TTKP33981 857 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 CTSKP43235 329 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 PDX1P52945 283 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 SMIM11AP58511 58 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 IGLV3-21P80748 117 aaPredicted RBP9.52□□□□□ -0.89
C9orf43-201ENST00000288462 CHRNEQ04844 493 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 FAM53BQ14153 422 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 SEC23BQ15437 767 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 NPTX1Q15818 432 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 DUSP5Q16690 384 aa9.52□□□□□ -0.89
C9orf43-201ENST00000288462 NDUFA9Q16795 377 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms