RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 TMEM205Q6UW68 189 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 SPPL2CQ8IUH8 684 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 AQP12AQ8IXF9 295 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 HORMAD2Q8N7B1 307 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 TNIP2Q8NFZ5 429 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 MIPOL1Q8TD10 442 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 CT55Q8WUE5 264 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 C16orf58Q96GQ5 468 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 LRGUKQ96M69 825 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 CNPPD1Q9BV87 410 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 NRSN2Q9GZP1 204 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 SERHL2Q9H4I8 314 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 FAF1Q9UNN5 650 aaPredicted RBP17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 PADI2Q9Y2J8 665 aa17.63■□□□□ 0.41
PDLIM3-202ENST00000284770 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 HRKO00198 91 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 RAD1O60671 282 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 UMODP07911 640 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 NUDT7P0C024 238 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 AP2B1P63010 937 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 TXNL4AP83876 142 aaKnown RBP17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 FAM69BQ5VUD6 431 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 GLYATQ6IB77 296 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 MFSD12Q6NUT3 480 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 TNFAIP8L2Q6P589 184 aaPredicted RBP17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 PTOV1Q86YD1 416 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 OR52R1Q8NGF1 315 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 OR14A16Q8NHC5 309 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 DAZLQ92904 295 aaKnown RBP17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 DUS3LQ96G46 650 aaKnown RBP17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 SENP5Q96HI0 755 aaPredicted RBP17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 FBXL20Q96IG2 436 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 ACTRT3Q9BYD9 372 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 TRIM15Q9C019 465 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 ASCL3Q9NQ33 180 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 EQTNQ9NQ60 294 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 ERVK-19Q9WJR5 959 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 CFAP54Q96N23 3096 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 SDK2Q58EX2 2172 aa17.62■□□□□ 0.41
PDLIM3-202ENST00000284770 TCRBV5S2A0A599 114 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 BRINP1O60477 761 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 COQ9O75208 318 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 DXOO77932 396 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 SSTR4P31391 388 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 FOLR3P41439 243 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 STAT5AP42229 794 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 PRIM2P49643 509 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 DUSP8Q13202 625 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 CAMK2BQ13554 666 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 SFT2D3Q587I9 215 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 ZFP1Q6P2D0 407 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 ERICH5Q6P6B1 374 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 ZCCHC12Q6PEW1 402 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 RNF111Q6ZNA4 994 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 ZZZ3Q8IYH5 903 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 OR7G1Q8NGA0 311 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 RSRC1Q96IZ7 334 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 FAM117AQ9C073 453 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 OR51I1Q9H343 314 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 TMEM38AQ9H6F2 299 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 GORASP2Q9H8Y8 452 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 THUMPD1Q9NXG2 353 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 C19orf25Q9UFG5 118 aaPredicted RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 FARSAQ9Y285 508 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 HMGN4O00479 90 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 NME6O75414 186 aaPredicted RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 DDAH2O95865 285 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 ANPEPP15144 967 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 MAN2A2P49641 1150 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 KHKP50053 298 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 ANXA11P50995 505 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 DSTNP60981 165 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 RPS15P62841 145 aaKnown RBP17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 GCNT6Q5T4J0 391 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 PACS2Q86VP3 889 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 GOLM1Q8NBJ4 401 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 SLCO4A1Q96BD0 722 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 YIPF4Q9BSR8 244 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 GPR87Q9BY21 358 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 OR10A5Q9H207 317 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 TCFL5Q9UL49 500 aa17.61■□□□□ 0.41
PDLIM3-202ENST00000284770 C21orf140B9A014 251 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 PCDH17O14917 1159 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 PRAMEF2O60811 474 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 IGKV3-11P04433 115 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 EMDP50402 254 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 RBBP4Q09028 425 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 RTP5Q14D33 572 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 VMACQ2NL98 169 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 CDC73Q6P1J9 531 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 CPEB2Q7Z5Q1 589 aaKnown RBP17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 LGI4Q8N135 537 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 ZNF615Q8N8J6 731 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 MORN4Q8NDC4 146 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 OR52E4Q8NGH9 312 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 OR5D16Q8NGK9 328 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 SLC2A12Q8TD20 617 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 MAL2Q969L2 176 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 ART5Q96L15 291 aa17.6■□□□□ 0.41
PDLIM3-202ENST00000284770 MESP1Q9BRJ9 268 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms