RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 BTBD1Q9H0C5 482 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 SMG9Q9H0W8 520 aaKnown RBP13.47□□□□□ -0.25
VPS26B-201ENST00000281187 P2RX2Q9UBL9 471 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 EXOSC1Q9Y3B2 195 aaKnown RBP13.47□□□□□ -0.25
VPS26B-201ENST00000281187 NEDD8-MDP1E9PL57 170 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 ALDH1A1P00352 501 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 ALPPP05187 535 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 GNSP15586 552 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 ELK1P19419 428 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 PDHA2P29803 388 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 ANXA11P50995 505 aaKnown RBP13.47□□□□□ -0.25
VPS26B-201ENST00000281187 EPHB3P54753 998 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 BRAT1Q6PJG6 821 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 DCAF4L2Q8NA75 395 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 OR2AG1Q9H205 316 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 MVB12BQ9H7P6 319 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 MGAT4CQ9UBM8 478 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 FBXW2Q9UKT8 454 aa13.47□□□□□ -0.25
VPS26B-201ENST00000281187 EXO1Q9UQ84 846 aaKnown RBP13.47□□□□□ -0.25
VPS26B-201ENST00000281187 PITPNM1O00562 1244 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 OR1F1O43749 312 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 ZNF865P0CJ78 1059 aaPredicted RBP13.46□□□□□ -0.25
VPS26B-201ENST00000281187 UQCRC2P22695 453 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 NCBP2P52298 156 aaKnown RBP eCLIP13.46□□□□□ -0.25
VPS26B-201ENST00000281187 LIM2P55344 173 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 ILKQ13418 452 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 EXOSC2Q13868 293 aaKnown RBP13.46□□□□□ -0.25
VPS26B-201ENST00000281187 CDONQ4KMG0 1287 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 DEFB128Q7Z7B8 93 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 TRMT10AQ8TBZ6 339 aaKnown RBP13.46□□□□□ -0.25
VPS26B-201ENST00000281187 DOK4Q8TEW6 326 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 TADA1Q96BN2 335 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 TMEM169Q96HH4 297 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 ENTPD4Q9Y227 616 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 PCDHGB7Q9Y5F8 929 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 ADAM12O43184 909 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 SLC19A2O60779 497 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 CD22P20273 847 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 CTSOP43234 321 aaPredicted RBP13.46□□□□□ -0.25
VPS26B-201ENST00000281187 PITPNBP48739 271 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 ARHGDIBP52566 201 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 NDUFAF6Q330K2 333 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 TOR1AIP1Q5JTV8 583 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 OR4M1Q8NGD0 313 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 TNFAIP8L1Q8WVP5 186 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 AUTS2Q8WXX7 1259 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 ST8SIA2Q92186 375 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 EFCAB11Q9BUY7 163 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 DDX31Q9H8H2 851 aaKnown RBP13.46□□□□□ -0.25
VPS26B-201ENST00000281187 PLEKHB1Q9UF11 243 aaPredicted RBP13.46□□□□□ -0.25
VPS26B-201ENST00000281187 TMEM5Q9Y2B1 443 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 DNAH12Q6ZR08 3092 aa13.46□□□□□ -0.25
VPS26B-201ENST00000281187 A0A0B4J293 547 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 SCAMP1O15126 338 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 PRODHO43272 600 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 PRAMEF4O60810 478 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 ARAFP10398 606 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 SHC1P29353 583 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 PYCR1P32322 319 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 ZNF157P51786 506 aaPredicted RBP13.46□□□□□ -0.26
VPS26B-201ENST00000281187 STK11Q15831 433 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 ZNF311Q5JNZ3 666 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 PRAMEF9Q5VWM5 478 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 ZNF782Q6ZMW2 699 aaPredicted RBP13.46□□□□□ -0.26
VPS26B-201ENST00000281187 CHST9Q7L1S5 443 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 SERPINA12Q8IW75 414 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 RNF31Q96EP0 1072 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 TMEM43Q9BTV4 400 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 ARL6Q9H0F7 186 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 CXorf36Q9H7Y0 433 aa13.46□□□□□ -0.26
VPS26B-201ENST00000281187 MBD1Q9UIS9 605 aaPredicted RBP13.46□□□□□ -0.26
VPS26B-201ENST00000281187 UBE2QL1A1L167 161 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 DUSP11O75319 330 aaKnown RBP13.45□□□□□ -0.26
VPS26B-201ENST00000281187 AHRP35869 848 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 SLC11A1P49279 550 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 STARP49675 285 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 CLLU1OSQ5K130 101 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 FAM27D1Q5T7N8 215 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 GRHL2Q6ISB3 625 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 PLBD1Q6P4A8 553 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 TEX261Q6UWH6 196 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 ESPNLQ6ZVH7 1005 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 CPOQ8IVL8 374 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 UBTD2Q8WUN7 234 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 GIMAP1Q8WWP7 306 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 UBE2E3Q969T4 207 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 TAC3Q9UHF0 121 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 U3KQ87 197 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 CDK2AP1O14519 115 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 ARPC5O15511 151 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 MMP11P24347 488 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 GPR1P46091 355 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 LSM11P83369 360 aaKnown RBP eCLIP13.45□□□□□ -0.26
VPS26B-201ENST00000281187 EIF4EBP2Q13542 120 aaPredicted RBP13.45□□□□□ -0.26
VPS26B-201ENST00000281187 FCRLBQ6BAA4 426 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 PGBD2Q6P3X8 592 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 CDK20Q8IZL9 346 aa13.45□□□□□ -0.26
VPS26B-201ENST00000281187 KLK6Q92876 244 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms