RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 IL17RELQ6ZVW7 336 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 MEPCEQ7L2J0 689 aaKnown RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 RD3Q7Z3Z2 195 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 DTX2Q86UW9 622 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 LONP2Q86WA8 852 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ADGRG3Q86Y34 549 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 MICU2Q8IYU8 434 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 LRRC34Q8IZ02 419 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 GTPBP8Q8N3Z3 284 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 LRRC17Q8N6Y2 441 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ENGASEQ8NFI3 743 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 GIPC3Q8TF64 312 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 SCFD1Q8WVM8 642 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 HAS2Q92819 552 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 WBP2Q969T9 261 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ZNF274Q96GC6 653 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 PDLIM2Q96JY6 352 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 FOXN4Q96NZ1 517 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ZNF317Q96PQ6 595 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 FRG2BQ96QU4 278 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 PCGF1Q9BSM1 259 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 C9orf16Q9BUW7 83 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 FSD1LQ9BXM9 530 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 RNF26Q9BY78 433 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 MFFQ9GZY8 342 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ANKRA2Q9H9E1 313 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 C6orf50Q9HD87 102 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 ZNF275Q9NSD4 429 aaPredicted RBP4.24□□□□□ -1.73
CD44-202ENST00000278385 OSER1Q9NX31 292 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 EURLQ9NYK6 297 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 AHSPQ9NZD4 102 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CDH9Q9ULB4 789 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 B9D1Q9UPM9 204 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 MAD1L1Q9Y6D9 718 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 MYH4Q9Y623 1939 aa4.24□□□□□ -1.73
CD44-202ENST00000278385 CENPFP49454 3210 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 NFASCO94856 1347 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 EMSYQ7Z589 1322 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 NRCAMQ92823 1304 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 COL11A1P12107 1806 aaPredicted RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 PARP14Q460N5 1801 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 MKI67P46013 3256 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 GSTTP1A0A1W2PQM5 241 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TCRBV7S3A2A0A539 114 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TMEM120BA0PK00 339 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 MEX3AA1L020 520 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 METTL21EPA6NDL7 271 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 EEF2KO00418 725 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 SLC22A2O15244 555 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 DUX1O43812 170 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SSX4O60224 188 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 HCN1O60741 890 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 NDUFS6O75380 124 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 GMNNO75496 209 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 NFATC1O95644 943 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CPNE6O95741 557 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 NUDT17P0C025 328 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 OR2T7P0C7T2 308 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SMIM10L2AP0DMW4 78 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SMIM10L2BP0DMW5 78 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CEACAM1P13688 526 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 GNSP15586 552 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TCN1P20061 433 aaPredicted RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 TPSB2P20231 275 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CYP3A5P20815 502 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 ZNF10P21506 573 aaPredicted RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 UQCRC2P22695 453 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 MAT2AP31153 395 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 DCTDP32321 178 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CD80P33681 288 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TPTEP56180 551 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 ARPC4P59998 168 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 VBP1P61758 197 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SKP1P63208 163 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 DMC1Q14565 340 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 GPNMBQ14956 572 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TGFBIQ15582 683 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TPSAB1Q15661 275 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 UBE2SQ16763 222 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 TMEM44Q2T9K0 475 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SLC25A53Q5H9E4 307 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CEP78Q5JTW2 689 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 VWA5B1Q5TIE3 1220 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 FAM46CQ5VWP2 391 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 DENND2CQ68D51 928 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 KIAA0895LQ68EN5 471 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SUMO4Q6EEV6 95 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 PLEKHA7Q6IQ23 1121 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 MFSD12Q6NUT3 480 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CCDC137Q6PK04 289 aaKnown RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 ZNF474Q6S9Z5 364 aaPredicted RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 PQLC2Q6ZP29 291 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 CDHR3Q6ZTQ4 885 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 GPRIN3Q6ZVF9 776 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 FRA10AC1Q70Z53 315 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 NIPA1Q7RTP0 329 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 SLC29A4Q7RTT9 530 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 WDR53Q7Z5U6 358 aaPredicted RBP4.23□□□□□ -1.73
CD44-202ENST00000278385 LHFPL4Q7Z7J7 247 aa4.23□□□□□ -1.73
CD44-202ENST00000278385 GPR65Q8IYL9 337 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms