RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 PBX4Q9BYU1 374 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 ERVK-18Q9QC07 812 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 HSPE1-MOB4S4R3N1 261 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 A0A0J9YY10 115 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 SLC9B1P1A6NJY1 282 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PLD2O14939 933 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 RDH16O75452 317 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 CKMT1AP12532 417 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 SELENOWP63302 87 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PIGFQ07326 219 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 SERTAD2Q14140 314 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 LYSMD4Q5XG99 296 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 RBM12BQ8IXT5 1001 aaKnown RBP14.62□□□□□ -0.07
TIMP3-201ENST00000266085 TOMM5Q8N4H5 51 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 SLC5A8Q8N695 610 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 PROKR1Q8TCW9 393 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 GAL3ST3Q96A11 431 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 TTTY10Q9BZA0 68 aa14.62□□□□□ -0.07
TIMP3-201ENST00000266085 KIAA1551Q9HCM1 1747 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 E2F3O00716 465 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 IGLV3-25P01717 112 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 TNFRSF1BP20333 461 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 TPTEP56180 551 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 SPHARQ15513 63 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF367Q7RTV3 350 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 LHFPL3Q86UP9 236 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 UHRF1Q96T88 793 aaPredicted RBP14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ORAI3Q9BRQ5 295 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 TTYH2Q9BSA4 534 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 LDAHQ9H6V9 325 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 CUEDC1Q9NWM3 386 aaPredicted RBP14.61□□□□□ -0.07
TIMP3-201ENST00000266085 MARF1Q9Y4F3 1742 aaKnown RBP14.61□□□□□ -0.07
TIMP3-201ENST00000266085 SORBS2O94875 1100 aaKnown RBP14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF829Q3KNS6 432 aaPredicted RBP14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ALG10BQ5I7T1 473 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 MINDY2Q8NBR6 621 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 MS4A4EQ96PG1 132 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 TUBA1CQ9BQE3 449 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 SLC30A2Q9BRI3 323 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 STARD5Q9NSY2 213 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 PPP4R1LQ9P1A2 415 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 GADD45AP24522 165 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 GDI2P50395 445 aaKnown RBP14.61□□□□□ -0.07
TIMP3-201ENST00000266085 HK3P52790 923 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ACTC1P68032 377 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ACTA1P68133 377 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ACY1Q03154 408 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ANKDD1AQ495B1 522 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 RUNDC3AQ59EK9 446 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ALOXE3Q9BYJ1 711 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 MYNNQ9NPC7 610 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 SMIM30A4D0T7 59 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 GABRR3A8MPY1 467 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 GFRA2O00451 464 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 FLRT2O43155 660 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 GATBO75879 557 aaKnown RBP14.61□□□□□ -0.07
TIMP3-201ENST00000266085 STSP08842 583 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 MC3RP41968 323 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 HSF2Q03933 536 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF77Q15935 545 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 LIPKQ5VXJ0 399 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 CPZQ66K79 652 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 SERPINA11Q86U17 422 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 NXPE3Q969Y0 559 aa14.61□□□□□ -0.07
TIMP3-201ENST00000266085 SLC22A31A6NKX4 558 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 WASHC1A8K0Z3 465 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 PRAMEF2O60811 474 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 CSTBP04080 98 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 HMGN2P05204 90 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 PEPDP12955 493 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 PTGER1P34995 402 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 GPR4P46093 362 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 TBC1D25Q3MII6 688 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 WASH2PQ6VEQ5 465 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 DCP2Q8IU60 420 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 SLITRK4Q8IW52 837 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 ACBD7Q8N6N7 88 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 TMEM168Q9H0V1 697 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 CST11Q9H112 138 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF696Q9H7X3 374 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 OBP2AQ9NY56 170 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 PADI2Q9Y2J8 665 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 A0A1B0GVI7 797 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 TRAPPC13A5PLN9 417 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 SLC1A7O00341 560 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 LSM1O15116 133 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 PYCR1P32322 319 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 RPS15P62841 145 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 RPE65Q16518 533 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 MMP27Q9H306 513 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 ASB6Q9NWX5 421 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 PCDHGB2Q9Y5G2 931 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 TMEM14AQ9Y6G1 99 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 ABCA3Q99758 1704 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 DOCK2Q92608 1830 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 H3BSH0 61 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 HOXC11O43248 304 aaPredicted RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 PABPC4LP0CB38 370 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 LHCGRP22888 699 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 MAP2K4P45985 399 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms