RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 AMZ2Q86W34 360 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 ENKURQ8TC29 256 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 RAD51AP1Q96B01 352 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 CXorf40BQ96DE9 158 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 RNF31Q96EP0 1072 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 FERD3LQ96RJ6 166 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 ZBP1Q9H171 429 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 NLKQ9UBE8 527 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 PLEKHB1Q9UF11 243 aaPredicted RBP8.61□□□□□ -1.03
MSH4-201ENST00000263187 MGAT4BQ9UQ53 548 aa8.61□□□□□ -1.03
MSH4-201ENST00000263187 ARID1BQ8NFD5 2236 aaPredicted RBP8.61□□□□□ -1.03
MSH4-201ENST00000263187 HEATR5BQ9P2D3 2071 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 HYKKA2RU49 373 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ANKRD34BA5PLL1 514 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 IGLON5A6NGN9 336 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 QSOX1O00391 747 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 FAAHO00519 579 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 LILRB3O75022 631 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 EPPINO95925 133 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 TP53P04637 393 aaPredicted RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 IFI30P13284 250 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CEBPBP17676 345 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 MYL9P24844 172 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 KIR2DL3P43628 341 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 RFX3P48380 749 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 SLC16A1P53985 500 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 RHAGQ02094 409 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 SCN1BQ07699 218 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 LTB4RQ15722 352 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 FCRLBQ6BAA4 426 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CNKSR3Q6P9H4 555 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 LYPD8Q6UX82 237 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 SLC39A5Q6ZMH5 540 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CCDC149Q6ZUS6 474 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ASB18Q6ZVZ8 466 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 RRM2BQ7LG56 351 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 FAM129CQ86XR2 697 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 OR4N5Q8IXE1 308 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 FLCNQ8NFG4 579 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 OR8D4Q8NGM9 314 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 OR5P2Q8WZ92 322 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CITED4Q96RK1 184 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 MED20Q9H944 212 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 PAK6Q9NQU5 681 aaPredicted RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 AHSPQ9NZD4 102 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 KCND3Q9UK17 655 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 DSPPQ9NZW4 1301 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 LOC102723532A0A0G2JNH3 316 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 C4orf51C9J302 202 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 KIAA0355O15063 1070 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 NDUFS4O43181 175 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ERI3O43414 337 aaKnown RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 RAB36O95755 333 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CCNYL3P0C7X3 344 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 GNSP15586 552 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 S100A1P23297 94 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CXCR2P25025 360 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ACADLP28330 430 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CTBP2P56545 445 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 STXBP1P61764 594 aaKnown RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 KRR1Q13601 381 aaKnown RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 LRRC32Q14392 662 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 KRT33BQ14525 404 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 C9orf64Q5T6V5 341 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 LILRA6Q6PI73 481 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 C19orf48Q6RUI8 117 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ZNF730Q6ZMV8 503 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ZNF793Q6ZN11 406 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 UBE3DQ7Z6J8 389 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CADM2Q8N3J6 435 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ZNF557Q8N988 423 aaPredicted RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 ASCC1Q8N9N2 400 aaKnown RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 TP53I13Q8NBR0 393 aaPredicted RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 CREB3L4Q8TEY5 395 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 MTERF3Q96E29 417 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 COQ10AQ96MF6 247 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 AIF1LQ9BQI0 150 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 WACQ9BTA9 647 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 KATNB1Q9BVA0 655 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 MAN2C1Q9NTJ4 1040 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 NDUFB11Q9NX14 153 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 SNX7Q9UNH6 387 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CLCA2Q9UQC9 943 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 A3GALT2U3KPV4 340 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ALPK2Q86TB3 2170 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 A0A087WUU8 490 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 SHISA3A0PJX4 238 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 FAM170BA6NMN3 283 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 AKR7A2O43488 359 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 PIP5K1CO60331 668 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 FCMRO60667 390 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ADRB3P13945 408 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 RPL3P39023 403 aaKnown RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 SNRPNP63162 240 aaKnown RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 ID2Q02363 134 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CHRNEQ04844 493 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ZNF33BQ06732 778 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 NCF4Q15080 339 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 C12orf73Q69YU5 71 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms