RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 RORAP35398 523 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.45□□□□□ -0.26
SCARF1-201ENST00000263071 DDI2Q5TDH0 399 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 ZNF852Q6ZMS4 543 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 OLIG3Q7RTU3 272 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 OR4A15Q8NGL6 344 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 FATE1Q969F0 183 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 CLMPQ9H6B4 373 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 ZNF334Q9HCZ1 680 aaPredicted RBP13.45□□□□□ -0.26
SCARF1-201ENST00000263071 MS4A12Q9NXJ0 267 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 NDRG2Q9UN36 371 aaKnown RBP13.45□□□□□ -0.26
SCARF1-201ENST00000263071 KLK4Q9Y5K2 254 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 SDK1Q7Z5N4 2213 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 NPIPB15A6NHN6 443 aaPredicted RBP13.45□□□□□ -0.26
SCARF1-201ENST00000263071 ARNTLO00327 626 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 GFRA2O00451 464 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 PTHP01270 115 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 OR56A5P0C7T3 313 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 EPORP19235 508 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 CCR7P32248 378 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 SYTL3Q4VX76 610 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 ARTNQ5T4W7 220 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 ADGRF1Q5T601 910 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 RBMS3Q6XE24 437 aaKnown RBP13.45□□□□□ -0.26
SCARF1-201ENST00000263071 MACC1Q6ZN28 852 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 CCDC71Q8IV32 467 aaPredicted RBP13.45□□□□□ -0.26
SCARF1-201ENST00000263071 CELF5Q8N6W0 485 aaKnown RBP13.45□□□□□ -0.26
SCARF1-201ENST00000263071 COL21A1Q96P44 957 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 SLC38A3Q99624 504 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 SLC28A3Q9HAS3 691 aa13.45□□□□□ -0.26
SCARF1-201ENST00000263071 SCN4AP35499 1836 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 IGLV3-10A0A075B6K4 115 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 RGS11O94810 467 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 LPLP06858 475 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 IGFBP1P08833 259 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 SOX3P41225 446 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 MAGEA2P43356 314 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 PRKCZQ05513 592 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 CRHR2Q13324 411 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 KEAP1Q14145 624 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 CCSMST1Q4G0I0 132 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 MORN1Q5T089 497 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 TMPRSS11BQ86T26 416 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 OR5M11Q96RB7 305 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 ZIC5Q96T25 663 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 HDHD2Q9H0R4 259 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 QRSL1Q9H0R6 528 aaKnown RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 SGK2Q9HBY8 427 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 DNAJC27Q9NZQ0 273 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 C5AR2Q9P296 337 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 SLC6A5Q9Y345 797 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 AP2A2O94973 939 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 APEX1P27695 318 aaKnown RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 ACSL1P33121 698 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 ACY1Q03154 408 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 RIPPLY1Q0D2K3 151 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 PCBP2Q15366 365 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 LGI4Q8N135 537 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 ZNF454Q8N9F8 522 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 OR10G2Q8NGC3 310 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 AKR7LQ8NHP1 331 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 GTF3AQ92664 365 aaKnown RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 MGLLQ99685 303 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 NIPSNAP1Q9BPW8 284 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 CPPED1Q9BRF8 314 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 ANKRD19PQ9H560 264 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 EMC7Q9NPA0 242 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 PIKFYVEQ9Y2I7 2098 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 SLC35F4A4IF30 521 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 SULT1C2O00338 296 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 TERTO14746 1132 aaKnown RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 RHCEP18577 417 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 BDKRB1P46663 353 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 IL18Q14116 193 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 SMCO1Q147U7 214 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 FRG2Q64ET8 278 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 TNFAIP8L2Q6P589 184 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 BVESQ8NE79 360 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 RNASE11Q8TAA1 199 aaKnown RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 FBLIM1Q8WUP2 373 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 UPF1Q92900 1129 aaKnown RBP eCLIP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 ZBED6CLQ96FA7 236 aaPredicted RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 SFXN2Q96NB2 322 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 FRG2BQ96QU4 278 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 MARVELD1Q9BSK0 173 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 ZCCHC2Q9C0B9 1178 aaKnown RBP13.44□□□□□ -0.26
SCARF1-201ENST00000263071 KCMF1Q9P0J7 381 aa13.44□□□□□ -0.26
SCARF1-201ENST00000263071 A8MXK9 166 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 SCAMP1O15126 338 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 HCN1O60741 890 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 CKBP12277 381 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 PRF1P14222 555 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 FPR1P21462 350 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 CTGFP29279 349 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 MC2RQ01718 297 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 SLC3A1Q07837 685 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 ABHD18Q0P651 414 aa13.43□□□□□ -0.26
SCARF1-201ENST00000263071 CPTPQ5TA50 214 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms