RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 KLHL9Q9P2J3 617 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 TMEM14AQ9Y6G1 99 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 FOSL1P15407 271 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 RPS15P62841 145 aaKnown RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 SNTB2Q13425 540 aaKnown RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 ZNF181Q2M3W8 571 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 HES5Q5TA89 166 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 GPRC5BQ9NZH0 403 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 ABRACLQ9P1F3 81 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 SDC3O75056 442 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 TIA1P31483 386 aaKnown RBP eCLIP13.62□□□□□ -0.23
CUX2-201ENST00000261726 RPL26P61254 145 aaKnown RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 KIAA0895LQ68EN5 471 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 SLC18B1Q6NT16 456 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 GPR149Q86SP6 731 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 ZUFSPQ96AP4 578 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 PTBP2Q9UKA9 531 aaKnown RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 LAMB4A4D0S4 1761 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 C6P13671 934 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 CDK2P24941 298 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 CSNK2A1P68400 391 aaPredicted RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 CSNK2A3Q8NEV1 391 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 LRR1Q96L50 414 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 PELOQ9BRX2 385 aaKnown RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 SYNPO2LQ9H987 977 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 FAIMQ9NVQ4 179 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 PAQR5Q9NXK6 330 aaPredicted RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 ZNF705FA8MVS1 300 aaPredicted RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 ZNF705DP0CH99 300 aaPredicted RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 ZNF705BP0CI00 300 aaPredicted RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 ASCC1Q8N9N2 400 aaKnown RBP13.62□□□□□ -0.23
CUX2-201ENST00000261726 ZNF681Q96N22 645 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 ASF1BQ9NVP2 202 aa13.62□□□□□ -0.23
CUX2-201ENST00000261726 IGLON5A6NGN9 336 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 RAD1O60671 282 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ATG12O94817 140 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 RBMS1P29558 406 aaKnown RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 LMAN2Q12907 356 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 NKPD1Q17RQ9 610 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ZNF674Q2M3X9 581 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 C6orf136Q5SQH8 315 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ASB15Q8WXK1 588 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 GLYATL1Q969I3 302 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 DPH7Q9BTV6 452 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 FAM171A2A8MVW0 826 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 CDKN2CP42773 168 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 FAPQ12884 760 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 CTC1Q2NKJ3 1217 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 OR4C11Q6IEV9 310 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 BAIAP2L2Q6UXY1 529 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ZNF761Q86XN6 746 aaPredicted RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 CDH20Q9HBT6 801 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 STUB1Q9UNE7 303 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 GPR52Q9Y2T5 361 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 PSAT1Q9Y617 370 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 GXYLT2A0PJZ3 443 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ANKRD33BA6NCL7 494 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ANHXE9PGG2 379 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 GJB5O95377 273 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 CD79AP11912 226 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 TLE3Q04726 772 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ARHGAP11AQ6P4F7 1023 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 TOMM40LQ969M1 308 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 OR4K3Q96R72 315 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 CWH43Q9H720 699 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 APOBEC3BQ9UH17 382 aaKnown RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 C1orf226A1L170 272 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 FOXD2O60548 495 aaPredicted RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 SNRPD2P62316 118 aaKnown RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 RNASE10Q5GAN6 216 aaKnown RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 FAM180BQ6P0A1 224 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 C6orf120Q7Z4R8 191 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ZNF695Q8IW36 515 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ABCG5Q9H222 651 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ACOT7O00154 380 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 RTCAO00442 366 aaKnown RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 SERPINA7P05543 415 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 PBX2P40425 430 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 CAV2P51636 162 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 DNAJB13P59910 316 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ERVK-16P61578 105 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 HYAL4Q2M3T9 481 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ZNF529Q6P280 563 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 PLBD1Q6P4A8 553 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 MOCOSQ96EN8 888 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 SEZ6LQ9BYH1 1024 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 CRTAPO75718 401 aaPredicted RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 RNH1P13489 461 aaKnown RBP13.61□□□□□ -0.23
CUX2-201ENST00000261726 DYRK1AQ13627 763 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ATG9BQ674R7 924 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ZNF619Q8N2I2 560 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 ZNF382Q96SR6 550 aa13.61□□□□□ -0.23
CUX2-201ENST00000261726 A0A1W2PQU0 124 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 C2orf72A6NCS6 295 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 RORAP35398 523 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 RPS15AP62244 130 aaKnown RBP13.6□□□□□ -0.23
CUX2-201ENST00000261726 ESX1Q8N693 406 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 OR8J3Q8NGG0 315 aa13.6□□□□□ -0.23
CUX2-201ENST00000261726 C22orf15Q8WYQ4 148 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms