RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 ASGR2P07307 311 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 DDCP20711 480 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 MMP12P39900 470 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 CD79BP40259 229 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SEC13P55735 322 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SNRPD2P62316 118 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 IL18Q14116 193 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SYT14P1Q58G82 188 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 DDI2Q5TDH0 399 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 MFSD4BQ5TF39 518 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 PROKR2Q8NFJ6 384 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 RAD51AP1Q96B01 352 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 XKR8Q9H6D3 395 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC13A4Q9UKG4 626 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 DMDP11532 3685 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 C2orf92A0A1B0GVN3 265 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 TMPRSS11DO60235 418 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SRPRAP08240 638 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 CSF3P09919 207 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 CCNYL3P0C7X3 344 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 CELP19835 753 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 PPP2R1BP30154 601 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 ETV6P41212 452 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SSR2P43308 183 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 TRIQKQ629K1 86 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF547Q8IVP9 402 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 ANKRD53Q8N9V6 530 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 OR5P2Q8WZ92 322 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 UBE2E3Q969T4 207 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF354BQ96LW1 612 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SGPP1Q9BX95 441 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 PLA2G12AQ9BZM1 189 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 HYKKA2RU49 373 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 SOX18P35713 384 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 RNF144AP50876 292 aaPredicted RBP13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 LIMK1P53667 647 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 DCDC1P59894 354 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 QPRTQ15274 297 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 GPR19Q15760 415 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 KHDRBS2Q5VWX1 349 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 CCDC116Q8IYX3 515 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 TM9SF4Q92544 642 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 NUS1Q96E22 293 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 NEURL3Q96EH8 262 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 FRMD6Q96NE9 622 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 ZCCHC2Q9C0B9 1178 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 CLEC1BQ9P126 229 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 NLKQ9UBE8 527 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 LSM2Q9Y333 95 aaKnown RBP13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 PCDHGB2Q9Y5G2 931 aa13.66□□□□□ -0.22
SFSWAP-201ENST00000261674 GSAPA4D1B5 854 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 FAM172BPA6NC97 362 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 PDE9AO76083 593 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 RAB36O95755 333 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 GDI1P31150 447 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 KCNJ5P48544 419 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 SNRPGP62308 76 aaKnown RBP13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 DHCR24Q15392 516 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 DOK4Q8TEW6 326 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 RNFT2Q96EX2 444 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 ZBED6CLQ96FA7 236 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC35G5Q96KT7 338 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 MIXL1Q9H2W2 232 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC9A8Q9Y2E8 581 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 SCN2AQ99250 2005 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 CPSF4LA6NMK7 179 aaKnown RBP13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 SLC30A4O14863 429 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 TSC22D2O75157 780 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 NCBP2P52298 156 aaKnown RBP eCLIP13.65□□□□□ -0.228e-14■■■■□ 21.9
SFSWAP-201ENST00000261674 FNDC3BQ53EP0 1204 aaKnown RBP13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 MEDAGQ5VYS4 303 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF57Q68EA5 555 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 C19orf48Q6RUI8 117 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 UNC5DQ6UXZ4 953 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 DPPA4Q7L190 304 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 OR4F15Q8NGB8 312 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 CREB3L4Q8TEY5 395 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 CHFRQ96EP1 664 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 ZNF582Q96NG8 517 aaPredicted RBP13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 TBX5Q99593 518 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 AIF1LQ9BQI0 150 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 ZDHHC5Q9C0B5 715 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 SFXN1Q9H9B4 322 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 CLCA2Q9UQC9 943 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 AP1M2Q9Y6Q5 423 aa13.65□□□□□ -0.22
SFSWAP-201ENST00000261674 FAM240BA0A1B0GVZ2 78 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 TBC1D3BA6NDS4 549 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM25AB3EWG3 89 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM25CB3EWG5 89 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 FAM25GB3EWG6 89 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SMLR1H3BR10 107 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 HPGDSO60760 199 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 SLC2A2P11168 524 aaPredicted RBP13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 C6P13671 934 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 CXCR2P25025 360 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 AVPR1BP47901 424 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 TAS2R41P59536 307 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 MLLT11Q13015 90 aaPredicted RBP13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 P2RY14Q15391 338 aa13.64□□□□□ -0.23
SFSWAP-201ENST00000261674 RASGRP3Q8IV61 690 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms