RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 DHFRP00374 187 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 FCER2P06734 321 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3HP0C7X1 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 GSTM3P21266 225 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 NT5EP21589 574 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CBLP22681 906 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 MMP11P24347 488 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 RPL4P36578 427 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 ACVR1BP36896 505 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CCR2P41597 374 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 HTR3AP46098 478 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CENPAP49450 140 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 DCDC1P59894 354 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 LSM11P83369 360 aaKnown RBP eCLIP4.48□□□□□ -1.69
USP44-201ENST00000258499 ST3GAL3Q11203 375 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 GPR19Q15760 415 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 SSX1Q16384 188 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TATDN3Q17R31 274 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TOR1AIP1Q5JTV8 583 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 FCRLBQ6BAA4 426 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3GQ6DHY5 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3CQ6IPX1 549 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 PGBD2Q6P3X8 592 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 GLCCI1Q86VQ1 547 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 PEX5LQ8IYB4 626 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TBC1D3Q8IZP1 549 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 VWA5B2Q8N398 1253 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 NLGN4YQ8NFZ3 816 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 OR4E2Q8NGC2 313 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 OR51A7Q8NH64 312 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 LILRB4Q8NHJ6 448 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 GRPEL2Q8TAA5 225 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 SLC35B4Q969S0 331 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 SAP130Q9H0E3 1048 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 IGFLR1Q9H665 355 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TMEM38AQ9H6F2 299 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 WDR26Q9H7D7 661 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 RNF121Q9H920 327 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 HHATLQ9HCP6 504 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 THSD1Q9NS62 852 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 GPATCH2Q9NW75 528 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CDV3Q9UKY7 258 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 GRIP1Q9Y3R0 1128 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ASCC3Q8N3C0 2202 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 IGLV3-16A0A075B6K0 115 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 IRGMA1A4Y4 181 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 FAM86C2PA6NEL3 165 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 HIDE1A8MVS5 230 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ZNF670-ZNF695F2Z2N8 137 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 EEF1E1O43324 174 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 TPD52L2O43399 206 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 FKTNO75072 461 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 TOXO94900 526 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CTSLP07711 333 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ADRB3P13945 408 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ZNF24P17028 368 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 PRPH2P23942 346 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ETV5P41161 510 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 MC3RP41968 323 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ETV1P50549 477 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 RAB14P61106 215 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 RHAGQ02094 409 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 STX4Q12846 297 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ILKQ13418 452 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 PUM1Q14671 1186 aaKnown RBP eCLIP4.48□□□□□ -1.69
USP44-201ENST00000258499 SUZ12Q15022 739 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 TRAM2Q15035 370 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 NDUFA9Q16795 377 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 PIP5KL1Q5T9C9 394 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 MLIPQ5VWP3 458 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 SDE2Q6IQ49 451 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 PLBD1Q6P4A8 553 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 VITQ6UXI7 678 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 DPPA4Q7L190 304 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 GET4Q7L5D6 327 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 CXXC5Q7LFL8 322 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 NOXA1Q86UR1 476 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ADIPOR2Q86V24 386 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 LSRQ86X29 649 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 VRK2Q86Y07 508 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CPOQ8IVL8 374 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CYB561A3Q8NBI2 242 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 LCN9Q8WX39 176 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CLIP3Q96DZ5 547 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 METTL2AQ96IZ6 378 aaKnown RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 CCDC3Q9BQI4 270 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CDCA4Q9BXL8 241 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ABCG5Q9H222 651 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CLEC4MQ9H2X3 399 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 ZC4H2Q9NQZ6 224 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ENAMQ9NRM1 1142 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 PHPT1Q9NRX4 125 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 METRNQ9UJH8 293 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ING4Q9UNL4 249 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 WDR45Q9Y484 360 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 CCDC88CQ9P219 2028 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 ABHD14A-ACY1A0A1B0GW23 586 aa4.48□□□□□ -1.69
USP44-201ENST00000258499 FOXE1O00358 373 aaPredicted RBP4.48□□□□□ -1.69
USP44-201ENST00000258499 TMPRSS11DO60235 418 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms