RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 LIMS3P0CW19 117 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 LIMS4P0CW20 117 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 CCR2P41597 374 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 MTNR1AP48039 350 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 PCDH1Q08174 1060 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 LIPIQ6XZB0 460 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 FAM26EQ8N5C1 309 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 GRPEL2Q8TAA5 225 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 ZFAND1Q8TCF1 268 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 TCEAL4Q96EI5 215 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 FAM46AQ96IP4 442 aaKnown RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 QRFPRQ96P65 431 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 EQTNQ9NQ60 294 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 SIRT3Q9NTG7 399 aaPredicted RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 MAN2C1Q9NTJ4 1040 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 TDP1Q9NUW8 608 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 MAT2BQ9NZL9 334 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 GSTK1Q9Y2Q3 226 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 FAM183AA6NL82 134 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 HOXA2O43364 376 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 LANCL1O43813 399 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 CRYZL1O95825 349 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 DDCP20711 480 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 PRAMEF14Q5SWL7 426 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 PRAMEF13Q5VWM6 474 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 RAET1GQ6H3X3 334 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 HSDL2Q6YN16 418 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 FAM83HQ6ZRV2 1179 aaPredicted RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 PRICKLE2Q7Z3G6 844 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 DDX53Q86TM3 631 aaKnown RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 ADIPOR2Q86V24 386 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 FAM181AQ8N9Y4 354 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 SLC37A3Q8NCC5 494 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 ZNF607Q96SK3 696 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 POLDIP3Q9BY77 421 aaKnown RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 SLC23A1Q9UHI7 598 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 TRAV6A0A075B6T7 132 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 ARRDC5A6NEK1 342 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 CPSF4LA6NMK7 179 aaKnown RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 PRKAR1AP10644 381 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 ZNF30P17039 623 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 CPN2P22792 545 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 AGFG1P52594 562 aaKnown RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 METTL3Q86U44 580 aaKnown RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 AMIGO1Q86WK6 493 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 CACUL1Q86Y37 369 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 ANKK1Q8NFD2 765 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 NEIL3Q8TAT5 605 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 SUN5Q8TC36 379 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 TRIM63Q969Q1 353 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 RBFOX1Q9NWB1 397 aaKnown RBP17.53■□□□□ 0.4
CHPF-201ENST00000243776 ZSCAN32Q9NX65 697 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 HCFC2Q9Y5Z7 792 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 KCNE3Q9Y6H6 103 aa17.53■□□□□ 0.4
CHPF-201ENST00000243776 ZC3H12DA2A288 527 aaKnown RBP17.52■□□□□ 0.4
CHPF-201ENST00000243776 MMP20O60882 483 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 POP7O75817 140 aaKnown RBP17.52■□□□□ 0.4
CHPF-201ENST00000243776 EPPINO95925 133 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 PAHP00439 452 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 RPL3P39023 403 aaKnown RBP17.52■□□□□ 0.4
CHPF-201ENST00000243776 GAS1P54826 345 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 LY6G5CQ5SRR4 150 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 IDNKQ5T6J7 187 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 LAMTOR1Q6IAA8 161 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 OR4M2Q8NGB6 313 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 ARSGQ96EG1 525 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 SGPP1Q9BX95 441 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 PPP1R3EQ9H7J1 279 aa17.52■□□□□ 0.4
CHPF-201ENST00000243776 ZCCHC3Q9NUD5 404 aaKnown RBP17.52■□□□□ 0.4
CHPF-201ENST00000243776 SCO1O75880 301 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 SYPP08247 313 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 POU3F3P20264 500 aaPredicted RBP17.52■□□□□ 0.39
CHPF-201ENST00000243776 ERP29P30040 261 aaKnown RBP17.52■□□□□ 0.39
CHPF-201ENST00000243776 OR3A3P47888 321 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 RAB33AQ14088 237 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 LASP1Q14847 261 aaKnown RBP17.52■□□□□ 0.39
CHPF-201ENST00000243776 QSOX2Q6ZRP7 698 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 KLBQ86Z14 1044 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 CPXM2Q8N436 756 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 TIFAQ96CG3 184 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 C16orf58Q96GQ5 468 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 ATF6BQ99941 703 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 A4GALTQ9NPC4 353 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 TM7SF3Q9NS93 570 aa17.52■□□□□ 0.39
CHPF-201ENST00000243776 ARSBP15848 533 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 BNC1Q01954 994 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 MPP7Q5T2T1 576 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 FAM205BPQ63HN1 556 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 SDE2Q6IQ49 451 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 PEX5LQ8IYB4 626 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 OR8H1Q8NGG4 311 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 OR5P2Q8WZ92 322 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 TRMT61BQ9BVS5 477 aaKnown RBP17.51■□□□□ 0.39
CHPF-201ENST00000243776 TMEM245Q9H330 911 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 CSNK1G3Q9Y6M4 447 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 KIAA1671Q9BY89 1806 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 TGM5O43548 720 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 SRPRAP08240 638 aaKnown RBP17.51■□□□□ 0.39
CHPF-201ENST00000243776 TRAPPC2P0DI81 140 aa17.51■□□□□ 0.39
CHPF-201ENST00000243776 TRAPPC2BP0DI82 140 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms