RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 SLCO4C1Q6ZQN7 724 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 CXXC5Q7LFL8 322 aaKnown RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 GOLGA7Q7Z5G4 137 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 VN1R5Q7Z5H4 357 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 LUZP2Q86TE4 346 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 LACC1Q8IV20 430 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 OR2L5Q8NG80 312 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 LRRC8CQ8TDW0 803 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 NANOS1Q8WY41 292 aaKnown RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 TIMP4Q99727 224 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 DOHHQ9BU89 302 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 GATA5Q9BWX5 397 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 EML4Q9HC35 981 aaKnown RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 ZNF629Q9UEG4 869 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 FOXD3Q9UJU5 478 aaPredicted RBP12.64□□□□□ -0.39
DDX39A-201ENST00000242776 TLN2Q9Y4G6 2542 aa12.64□□□□□ -0.39
DDX39A-201ENST00000242776 LRRC14BA6NHZ5 514 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 AHRRA9YTQ3 701 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 TBX6O95947 436 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 OTCP00480 354 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 CRYZQ08257 329 aaKnown RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 GALNT1Q10472 559 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 LCP2Q13094 533 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 STX3Q13277 289 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 BICRALQ6AI39 1079 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 ABHD17CQ6PCB6 329 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 LYPD8Q6UX82 237 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 ZCCHC23Q6ZST2 131 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 CXorf67Q86X51 503 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 HOMEZQ8IX15 550 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 KIRREL3Q8IZU9 778 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 KRT78Q8N1N4 520 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 LRRC25Q8N386 305 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 OR8K3Q8NH51 312 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 PAQR8Q8TEZ7 354 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 ANKRD9Q96BM1 317 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 SPACA9Q96E40 222 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 HSPBAP1Q96EW2 488 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 SENP5Q96HI0 755 aaPredicted RBP12.63□□□□□ -0.39
DDX39A-201ENST00000242776 MAGEB18Q96M61 343 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 DGAT2Q96PD7 388 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 GSTO2Q9H4Y5 243 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 MANSC1Q9H8J5 431 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 IPPKQ9H8X2 491 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 ACKR4Q9NPB9 350 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 FAM53CQ9NYF3 392 aa12.63□□□□□ -0.39
DDX39A-201ENST00000242776 HEATR5AQ86XA9 2040 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 TRIM64A6NGJ6 449 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 FAM171A2A8MVW0 826 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 SAP18O00422 153 aaKnown RBP12.62□□□□□ -0.39
DDX39A-201ENST00000242776 KLF11O14901 512 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 ARHGEF9O43307 516 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 UGDHO60701 494 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 SMPD2O60906 423 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 COX7A2P14406 83 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 TIMP3P35625 211 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 CPA2P48052 419 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 PKNOX1P55347 436 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 PPP2R2BQ00005 443 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 IRF8Q02556 426 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 LAPTM5Q13571 262 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 SERTAD2Q14140 314 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 MPEG1Q2M385 716 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 DCST1Q5T197 706 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 ZNF793Q6ZN11 406 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 TTLQ8NG68 377 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 TRPC4APQ8TEL6 797 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 CKAP2Q8WWK9 683 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 DIO2Q92813 273 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 PERPQ96FX8 193 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 COX4I2Q96KJ9 171 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 NSUN5Q96P11 429 aaKnown RBP12.62□□□□□ -0.39
DDX39A-201ENST00000242776 ZNF382Q96SR6 550 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 NTMT1Q9BV86 223 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 RBM24Q9BX46 236 aaKnown RBP12.62□□□□□ -0.39
DDX39A-201ENST00000242776 EHD1Q9H4M9 534 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 NOL11Q9H8H0 719 aaKnown RBP12.62□□□□□ -0.39
DDX39A-201ENST00000242776 SH2D2AQ9NP31 389 aa12.62□□□□□ -0.39
DDX39A-201ENST00000242776 SH3D21A4FU49 640 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 FGF17O60258 216 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 PRKRAO75569 313 aaKnown RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 CLEC3AO75596 197 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 HSPA4LO95757 839 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 CPN2P22792 545 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 CTSSP25774 331 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 MDH1P40925 334 aaKnown RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 SLC1A6P48664 564 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 CDH13P55290 713 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 ABCE1P61221 599 aaKnown RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 FOXF2Q12947 444 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 EIPR1Q53HC9 387 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 PAGE2BQ5JRK9 111 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 LIPJQ5W064 366 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 RPS27LQ71UM5 84 aaKnown RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 C9orf106Q8NAJ2 232 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 OR6Y1Q8NGX8 325 aa12.61□□□□□ -0.39
DDX39A-201ENST00000242776 ZNF75CPQ92670 426 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-201ENST00000242776 PTCD3Q96EY7 689 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms