RNA–Protein interactions for RNA: ENST00000233505.12

CENPA-201, Transcript of centromere protein A, humanhuman

TSL 1 (best) BASIC

Gene CENPA, Length 1,299 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-201ENST00000233505 C16orf47Q6ZP98 133 aaPredicted RBP17.8■□□□□ 0.44
CENPA-201ENST00000233505 ZNF227Q86WZ6 799 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 CYP4Z2PQ8N1L4 340 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 SIMC1Q8NDZ2 872 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 CATSPER1Q8NEC5 780 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 SCMH1Q96GD3 660 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 SGCZQ96LD1 299 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 ZBTB18Q99592 522 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 ITPAQ9BY32 194 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 LIN28AQ9H9Z2 209 aaKnown RBP17.8■□□□□ 0.44
CENPA-201ENST00000233505 NPHS2Q9NP85 383 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 TMEM45AQ9NWC5 275 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 HPF1Q9NWY4 346 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 DTX4Q9Y2E6 619 aa17.8■□□□□ 0.44
CENPA-201ENST00000233505 FRG2CA6NGY1 282 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 TO15178 435 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 ZNF354AO60765 605 aaPredicted RBP17.79■□□□□ 0.44
CENPA-201ENST00000233505 OR6B1O95007 311 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 F10P00742 488 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 FBXO45P0C2W1 286 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 TROVE2P10155 538 aaKnown RBP eCLIP17.79■□□□□ 0.44
CENPA-201ENST00000233505 CD46P15529 392 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 DRD5P21918 477 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 SOX3P41225 446 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 CDK9P50750 372 aaKnown RBP17.79■□□□□ 0.44
CENPA-201ENST00000233505 ATP4BP51164 291 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 WNT3P56703 355 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 NRG3P56975 720 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 UFM1P61960 85 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 LYPD8Q6UX82 237 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 MIER2Q8N344 545 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 GOLM1Q8NBJ4 401 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 VPS37AQ8NEZ2 397 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 HSPBAP1Q96EW2 488 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 LCORQ96JN0 433 aaPredicted RBP17.79■□□□□ 0.44
CENPA-201ENST00000233505 TEX37Q96LM6 180 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 C5orf34Q96MH7 638 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 SIGLEC12Q96PQ1 595 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 TRIM4Q9C037 500 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 FOLH1BQ9HBA9 442 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 C3orf14Q9HBI5 128 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 SIRT3Q9NTG7 399 aaPredicted RBP17.79■□□□□ 0.44
CENPA-201ENST00000233505 FGFR1OP2Q9NVK5 253 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 FAM120CQ9NX05 1096 aaKnown RBP17.79■□□□□ 0.44
CENPA-201ENST00000233505 GPR55Q9Y2T6 319 aaPredicted RBP17.79■□□□□ 0.44
CENPA-201ENST00000233505 CNTRLQ7Z7A1 2325 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 TENM4Q6N022 2769 aa17.79■□□□□ 0.44
CENPA-201ENST00000233505 PRSS51A0A1B0GVH4 220 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 CAPN14A8MX76 684 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SCN2BO60939 215 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SLC25A12O75746 678 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SLC22A3O75751 556 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 VIMP08670 466 aaKnown RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 NAGAP17050 411 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 TMED10P49755 219 aaKnown RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 NR0B1P51843 470 aaKnown RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 STX1BP61266 288 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 PRR5P85299 388 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 LRRC74AQ0VAA2 488 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 PGS1Q32NB8 556 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 ZNF791Q3KP31 576 aaPredicted RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 FAM174BQ3ZCQ3 159 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 ZNF766Q5HY98 468 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SPANXN4Q5MJ08 99 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 OR4F3Q6IEY1 312 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SLC25A25Q6KCM7 469 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 RTL4Q6ZR62 310 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 TMEM178AQ8NBL3 297 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 RFWD2Q8NHY2 731 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SFXN5Q8TD22 340 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 NUDT8Q8WV74 236 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 HOXB13Q92826 284 aaPredicted RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 TMEM125Q96AQ2 219 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 MOAP1Q96BY2 351 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SPACA9Q96E40 222 aaPredicted RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 MS4A4EQ96PG1 132 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 ZNF317Q96PQ6 595 aaPredicted RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 NXF5Q9H1B4 397 aaKnown RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 ANKRA2Q9H9E1 313 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 ANKRD10Q9NXR5 420 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 SPENQ96T58 3664 aaKnown RBP17.78■□□□□ 0.44
CENPA-201ENST00000233505 CPAMD8Q8IZJ3 1885 aa17.78■□□□□ 0.44
CENPA-201ENST00000233505 EMC8O43402 210 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 NME2P1O60361 137 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 ERN1O75460 977 aaKnown RBP17.77■□□□□ 0.44
CENPA-201ENST00000233505 C6orf47O95873 294 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 SP1P08047 785 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 CT45A8P0DMV1 189 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 CT45A9P0DMV2 189 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 NME2P22392 152 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 IL12AP29459 219 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 S100A3P33764 101 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 CT45A2Q5DJT8 189 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 METTL21CQ5VZV1 264 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 SPINK14Q6IE38 97 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 MSANTD1Q6ZTZ1 278 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 MARK4Q96L34 752 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 LMF2Q9BU23 707 aaKnown RBP17.77■□□□□ 0.44
CENPA-201ENST00000233505 SH2D2AQ9NP31 389 aa17.77■□□□□ 0.44
CENPA-201ENST00000233505 TIMMDC1Q9NPL8 285 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms