RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 OGFOD2Q6N063 350 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 SLC48A1Q6P1K1 146 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 EPGNQ6UW88 154 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 R3HCC1LQ7Z5L2 792 aaKnown RBP16.65■□□□□ 0.26
PFN1-201ENST00000225655 LIX1Q8N485 282 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 OR4K14Q8NGD5 310 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 SLC2A12Q8TD20 617 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 ANKRD9Q96BM1 317 aaPredicted RBP16.65■□□□□ 0.26
PFN1-201ENST00000225655 CHMP6Q96FZ7 201 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 RASL10BQ96S79 203 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 DMRTA2Q96SC8 542 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 PRPF18Q99633 342 aaKnown RBP16.65■□□□□ 0.26
PFN1-201ENST00000225655 OR8D2Q9GZM6 311 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 LIN28AQ9H9Z2 209 aaKnown RBP16.65■□□□□ 0.26
PFN1-201ENST00000225655 NPHS2Q9NP85 383 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 FGFR1OP2Q9NVK5 253 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 GIMAP2Q9UG22 337 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 PKDREJQ9NTG1 2253 aa16.65■□□□□ 0.26
PFN1-201ENST00000225655 A0A1B0GTH9 108 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 MYOCOSA0A1B0GUC4 107 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 GLOD5A6NK44 160 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 WWP2O00308 870 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 HS6ST1O60243 411 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 OR10H2O60403 315 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 OR6B1O95007 311 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 CLDN14O95500 239 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 GPR75O95800 540 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 COX6B1P14854 86 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 PTGS2P35354 604 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 SOX3P41225 446 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 RNF4P78317 190 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 IGLV3-21P80748 117 aaPredicted RBP16.64■□□□□ 0.25
PFN1-201ENST00000225655 FOLH1Q04609 750 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 RPS6KA2Q15349 733 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 LARP4Q71RC2 724 aaKnown RBP eCLIP16.64■□□□□ 0.257e-19■■■■■ 29.6
PFN1-201ENST00000225655 ZNF321PQ8N8H1 164 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 FAM57AQ8TBR7 257 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 STON2Q8WXE9 905 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 KLHL29Q96CT2 875 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 RBM18Q96H35 190 aaKnown RBP16.64■□□□□ 0.25
PFN1-201ENST00000225655 MAELQ96JY0 434 aaKnown RBP16.64■□□□□ 0.25
PFN1-201ENST00000225655 DGAT2Q96PD7 388 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 TSSK3Q96PN8 268 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 WDR55Q9H6Y2 383 aaPredicted RBP16.64■□□□□ 0.25
PFN1-201ENST00000225655 TCF7L2Q9NQB0 619 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 PLSCR2Q9NRY7 297 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 DEPPQ9NTK1 212 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 UTS2RQ9UKP6 389 aa16.64■□□□□ 0.25
PFN1-201ENST00000225655 FGF17O60258 216 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 IDO1P14902 403 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 PRPS1L1P21108 318 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 STX1BP61266 288 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 ID2Q02363 134 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 CDSNQ15517 529 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 FAM71E1Q6IPT2 247 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 IL20RBQ6UXL0 311 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 NCCRP1Q6ZVX7 275 aaPredicted RBP16.63■□□□□ 0.25
PFN1-201ENST00000225655 OR2M7Q8NG81 312 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 OR5L2Q8NGL0 311 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 ZNF721Q8TF20 911 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 PPCDCQ96CD2 204 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 MTERF3Q96E29 417 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 RILPQ96NA2 401 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 CCDC28BQ9BUN5 200 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 ATAD3AQ9NVI7 634 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 COPS7AQ9UBW8 275 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 TRIM33Q9UPN9 1127 aa16.63■□□□□ 0.25
PFN1-201ENST00000225655 A0A0G2JND7 137 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 PINLYPA6NC86 204 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 PGRMC2O15173 223 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 UBDO15205 165 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 CDC40O60508 579 aaKnown RBP eCLIP16.62■□□□□ 0.25
PFN1-201ENST00000225655 PRKRAO75569 313 aaKnown RBP16.62■□□□□ 0.25
PFN1-201ENST00000225655 ERAL1O75616 437 aaKnown RBP16.62■□□□□ 0.25
PFN1-201ENST00000225655 CSNK2A2P19784 350 aaPredicted RBP16.62■□□□□ 0.25
PFN1-201ENST00000225655 NTSP30990 170 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 STT3AP46977 705 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 IDH3AP50213 366 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 GNGT1P63211 74 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 IRX1P78414 480 aaPredicted RBP16.62■□□□□ 0.25
PFN1-201ENST00000225655 GSTA3Q16772 222 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 SLC9B1Q4ZJI4 515 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 ARHGAP11AQ6P4F7 1023 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 C3P1Q6ZMU1 363 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 RTL4Q6ZR62 310 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 MAVSQ7Z434 540 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 GDF7Q7Z4P5 450 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 GOLM1Q8NBJ4 401 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 OR52N2Q8NGI0 321 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 SGCZQ96LD1 299 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 ZBTB18Q99592 522 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 REEP4Q9H6H4 257 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 DCTN4Q9UJW0 460 aa16.62■□□□□ 0.25
PFN1-201ENST00000225655 EML6Q6ZMW3 1958 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 ACOT7O00154 380 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 ZNF195O14628 629 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 AKAP10O43572 662 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 LRATO95237 230 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 TPOP07202 933 aa16.61■□□□□ 0.25
PFN1-201ENST00000225655 SNRPB2P08579 225 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms