RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SFTPDP35247 375 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 GPR4P46093 362 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 TLE3Q04726 772 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 SLC18B1Q6NT16 456 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 PNCKQ6P2M8 343 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 VASH1Q7L8A9 365 aaPredicted RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 FIZ1Q96SL8 496 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 MTMR10Q9NXD2 777 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 PCTPQ9UKL6 214 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 MCTS1Q9ULC4 181 aaKnown RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 RNF215Q9Y6U7 377 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 CACNA1FO60840 1977 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 J3QRK9 145 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 RDH16O75452 317 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF888P0CJ79 500 aaPredicted RBP18■□□□□ 0.47
SMPD3-201ENST00000219334 PRSS56P0CW18 603 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 CLDN10P78369 228 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 EFR3AQ14156 821 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF773Q6PK81 442 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 LIPIQ6XZB0 460 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 HSD11B1LQ7Z5J1 315 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 OR52E2Q8NGJ4 325 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 NEIL3Q8TAT5 605 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 WDR20Q8TBZ3 569 aa18■□□□□ 0.47
SMPD3-201ENST00000219334 BCAT2O15382 392 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 MAGEA12P43365 314 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF404Q494X3 552 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 PTCRAQ6ISU1 281 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 C3P1Q6ZMU1 363 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF367Q7RTV3 350 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 CEACAM19Q7Z692 300 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 MCATQ8IVS2 390 aaKnown RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SLC30A2Q9BRI3 323 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 RBM24Q9BX46 236 aaKnown RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 DNTTIP1Q9H147 329 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 NFS1Q9Y697 457 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 TRBV2A0A0J9YWF9 115 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SLC9B1P1A6NJY1 282 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 DLGAP1O14490 977 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 ETFAP13804 333 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 AFF1P51825 1210 aaKnown RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 KCNAB2Q13303 367 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 TDGQ13569 410 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 CDKN3Q16667 212 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 BLOC1S3Q6QNY0 202 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 TMPRSS12Q86WS5 348 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 MCOLN1Q9GZU1 580 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 LRIT1Q9P2V4 623 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 PISDQ9UG56 409 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 UGDHO60701 494 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SLC19A2O60779 497 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 DIRAS3O95661 229 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SLC6A8P48029 635 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 CTXN1P60606 82 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 IRF4Q15306 451 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 CDKL4Q5MAI5 379 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 TMEM201Q5SNT2 666 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 PRAMEF8Q5VWM4 474 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 PRAMEF7Q5VXH5 474 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 TANKQ92844 425 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 ARL5BQ96KC2 179 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SACM1LQ9NTJ5 587 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF175Q9Y473 711 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SPEF1Q9Y4P9 236 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 AP1M2Q9Y6Q5 423 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 APOL3O95236 402 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 GRPRP30550 384 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 EIF2S3P41091 472 aaKnown RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 TPTEP56180 551 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 PLEKHN1Q494U1 663 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 NADK2Q4G0N4 442 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 RAB6CQ53S08 254 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 KANK2Q63ZY3 851 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 PPP1R3BQ86XI6 285 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 CLECL1Q8IZS7 167 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SAMD12Q8N8I0 201 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 GRPEL2Q8TAA5 225 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 RAB6CQ9H0N0 254 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 ZNF576Q9H609 170 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 RBBP9O75884 186 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 STOMP27105 288 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SNU13P55769 128 aaKnown RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 GSCP56915 257 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 C18orf21Q32NC0 220 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 LEG1Q6P5S2 330 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 LHFPL3Q86UP9 236 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 OR8H3Q8N146 312 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 GPR26Q8NDV2 337 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 MFSD8Q8NHS3 518 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 RPH3AQ9Y2J0 694 aaPredicted RBP17.99■□□□□ 0.47
SMPD3-201ENST00000219334 SIT1Q9Y3P8 196 aa17.99■□□□□ 0.47
SMPD3-201ENST00000219334 LAMP1P11279 417 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 EN2P19622 333 aaPredicted RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 XCR1P46094 333 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 HNRNPA0Q13151 305 aaKnown RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 OGFRL1Q5TC84 451 aaPredicted RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 HS3ST5Q8IZT8 346 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 TUBA1CQ9BQE3 449 aa17.98■□□□□ 0.47
SMPD3-201ENST00000219334 MOV10Q9HCE1 1003 aaKnown RBP17.98■□□□□ 0.47
SMPD3-201ENST00000219334 HSFX1Q9UBD0 423 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms