RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SMSP52788 366 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 CAV3P56539 151 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 NDUFA9Q16795 377 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 PLK5Q496M5 336 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 DDI2Q5TDH0 399 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 C1orf94Q6P1W5 598 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 PSRC1Q6PGN9 363 aaPredicted RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 PRR23CQ6ZRP0 262 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 ZNF765Q7L2R6 523 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 SHFQ7M4L6 423 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 UBE3DQ7Z6J8 389 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 GDPD1Q8N9F7 314 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 PLA2G15Q8NCC3 412 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 MORN4Q8NDC4 146 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 SLC9A6Q92581 669 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 RGMAQ96B86 450 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 KATNB1Q9BVA0 655 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 PLSCR3Q9NRY6 295 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 ACSS1Q9NUB1 689 aaPredicted RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 ZCCHC3Q9NUD5 404 aaKnown RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 SLC9A8Q9Y2E8 581 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 ANKRD34BA5PLL1 514 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 STK25O00506 426 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 ACP2P11117 423 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 ACADMP11310 421 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 SLC35F1Q5T1Q4 408 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 THOC7Q6I9Y2 204 aaKnown RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 RDH10Q8IZV5 341 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 C12orf76Q8N812 135 aaPredicted RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 PRR14Q9BWN1 585 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 TMEM245Q9H330 911 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 RANGRFQ9HD47 186 aaPredicted RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 WASH6PQ9NQA3 447 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 TM7SF3Q9NS93 570 aa16.28■□□□□ 0.2
USB1-201ENST00000219281 SF3B6Q9Y3B4 125 aaKnown RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 MRPS23Q9Y3D9 190 aaKnown RBP16.28■□□□□ 0.2
USB1-201ENST00000219281 UNC80Q8N2C7 3258 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 B4DXG7 233 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 POLR1CO15160 346 aaPredicted RBP16.27■□□□□ 0.2
USB1-201ENST00000219281 PRKRAO75569 313 aaKnown RBP16.27■□□□□ 0.2
USB1-201ENST00000219281 VIPR2P41587 438 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 HOXC5Q00444 222 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 REEP5Q00765 189 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 ENTPD8Q5MY95 495 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 AMZ2Q86W34 360 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 VWA5B2Q8N398 1253 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 ZFP41Q8N8Y5 198 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 OR52P1PQ8NH57 321 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 SLC7A6Q92536 515 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 NXPE3Q969Y0 559 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 FYTTD1Q96QD9 318 aaKnown RBP16.27■□□□□ 0.2
USB1-201ENST00000219281 TMEM246Q9BRR3 403 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 DPH7Q9BTV6 452 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 BEX2Q9BXY8 128 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 NDEL1Q9GZM8 345 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 SAP130Q9H0E3 1048 aa16.27■□□□□ 0.2
USB1-201ENST00000219281 PAQR5Q9NXK6 330 aaPredicted RBP16.27■□□□□ 0.2
USB1-201ENST00000219281 GLOD5A6NK44 160 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 SLC30A4O14863 429 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 PLA2G10O15496 165 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 VEGFDO43915 354 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 LCMT2O60294 686 aaKnown RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 CHRM4P08173 479 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 TRAPPC2P0DI81 140 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 TRAPPC2BP0DI82 140 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 ALPPL2P10696 532 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 ADRB3P13945 408 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 MYL9P24844 172 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 CD79BP40259 229 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 NCBP2P52298 156 aaKnown RBP eCLIP16.26■□□□□ 0.19
USB1-201ENST00000219281 DPTQ07507 201 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 MAP4K2Q12851 820 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 GPR19Q15760 415 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 TYW3Q6IPR3 259 aaKnown RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 KIAA1211LQ6NV74 962 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 SLC36A4Q6YBV0 504 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 LINC00471Q8N535 108 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 TMEM163Q8TC26 289 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 PRRC1Q96M27 445 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 AMDHD1Q96NU7 426 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 MED18Q9BUE0 208 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 KIF26AQ9ULI4 1882 aaPredicted RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 KIAA1549LQ6ZVL6 1849 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 PRODHO43272 600 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 STATHP02808 62 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 ERGP11308 486 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 KIR2DL3P43628 341 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 FABP5Q01469 135 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 RAB40BQ12829 278 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 TPBGQ13641 420 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 NDUFAF5Q5TEU4 345 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 QSOX2Q6ZRP7 698 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 VASH1Q7L8A9 365 aaPredicted RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 ADGRD2Q7Z7M1 963 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 TRIM48Q8IWZ4 208 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 TP53I13Q8NBR0 393 aaPredicted RBP16.26■□□□□ 0.19
USB1-201ENST00000219281 OR5K2Q8NHB8 316 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 UBASH3BQ8TF42 649 aa16.26■□□□□ 0.19
USB1-201ENST00000219281 UFD1Q92890 307 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 211.5 ms