RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 REEP3Q6NUK4 255 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ULK3Q6PHR2 472 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ZNF101Q8IZC7 436 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 BORCS8Q96FH0 119 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 GGT3PA6NGU5 568 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 SULT2B1O00204 365 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 AIREO43918 545 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 CCR5P51681 352 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 OR12D2P58182 307 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 EXOSC7Q15024 291 aaKnown RBP13.03□□□□□ -0.32
SIX4-201ENST00000216513 MEP1AQ16819 746 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 ADAMTSL4Q6UY14 1074 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 UEVLDQ8IX04 471 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 OR52R1Q8NGF1 315 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 CGREF1Q99674 301 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 CDCP1Q9H5V8 836 aa13.03□□□□□ -0.32
SIX4-201ENST00000216513 SH3PXD2BA1X283 911 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 METTL12A8MUP2 240 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 PRRG2O14669 202 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 ZNF821O75541 412 aaPredicted RBP13.02□□□□□ -0.32
SIX4-201ENST00000216513 C1orf105O95561 183 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 TACSTD2P09758 323 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 SLC6A6P31641 620 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 MMP12P39900 470 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 SNU13P55769 128 aaKnown RBP13.02□□□□□ -0.32
SIX4-201ENST00000216513 ZXDAP98168 799 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 EMX2Q04743 252 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 SLC18A2Q05940 514 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 TMEM52BQ4KMG9 183 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 C6orf120Q7Z4R8 191 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 OR6N2Q8NGY6 317 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 C16orf78Q8WTQ4 265 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 TMBIM1Q969X1 311 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 IFT46Q9NQC8 304 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 A0A1B0GVI7 797 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 KLRC4-KLRK1H3BQV0 150 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 EDNRAP25101 427 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 CCR7P32248 378 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 TIGD6Q17RP2 521 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 FANK1Q8TC84 345 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 NXPE2Q96DL1 559 aa13.02□□□□□ -0.32
SIX4-201ENST00000216513 PRRC2BQ5JSZ5 2229 aaKnown RBP13.02□□□□□ -0.32
SIX4-201ENST00000216513 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.33
SIX4-201ENST00000216513 TRAP1Q12931 704 aaKnown RBP13.02□□□□□ -0.33
SIX4-201ENST00000216513 PTGR1Q14914 329 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 PRAMEF8Q5VWM4 474 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 PRAMEF7Q5VXH5 474 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 ACOT4Q8N9L9 421 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 OR9K2Q8NGE7 335 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 OR1J4Q8NGS1 313 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 OR5K2Q8NHB8 316 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 BBS10Q8TAM1 723 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 TANKQ92844 425 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 CCDC120Q96HB5 630 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 ANKRD27Q96NW4 1050 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 LGALS13Q9UHV8 139 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 LAMP5Q9UJQ1 280 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 PLATP00750 562 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 TTKP33981 857 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 CCL7P80098 99 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 PON3Q15166 354 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 ZNF551Q7Z340 670 aaPredicted RBP13.02□□□□□ -0.33
SIX4-201ENST00000216513 COMMD6Q7Z4G1 85 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 LGI4Q8N135 537 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 ARMC10Q8N2F6 343 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 LRRC3Q9BY71 257 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 SACM1LQ9NTJ5 587 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 POLHQ9Y253 713 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 TMEM202A6NGA9 273 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 ZNF670-ZNF695F2Z2N8 137 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 HOXB6P17509 224 aaKnown RBP13.02□□□□□ -0.33
SIX4-201ENST00000216513 CRYZQ08257 329 aaKnown RBP13.02□□□□□ -0.33
SIX4-201ENST00000216513 RANBP10Q6VN20 620 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 STX12Q86Y82 276 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 OR8S1Q8NH09 359 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 SEMA6CQ9H3T2 930 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 C1GALT1Q9NS00 363 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 DNAJC27Q9NZQ0 273 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 SARDHQ9UL12 918 aa13.02□□□□□ -0.33
SIX4-201ENST00000216513 MICAL3Q7RTP6 2002 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 FAM166BA8MTA8 275 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 K7ESM1 405 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 AVPR2P30518 371 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 APLNRP35414 380 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 NPTX1Q15818 432 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 OR52B6Q8NGF0 335 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZUFSPQ96AP4 578 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZNF775Q96BV0 537 aaPredicted RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 EURLQ9NYK6 297 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 DOCK2Q92608 1830 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 LOC102723532A0A0G2JNH3 316 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 ZNF432O94892 652 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 FESP07332 822 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 MC3RP41968 323 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 SLC18A1P54219 525 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 EEFSECP57772 596 aaKnown RBP13.01□□□□□ -0.33
SIX4-201ENST00000216513 ADAM17P78536 824 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 BICRALQ6AI39 1079 aa13.01□□□□□ -0.33
SIX4-201ENST00000216513 SLC15A3Q8IY34 581 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms