RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 RUNDC3AQ59EK9 446 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 CCDC81Q6ZN84 652 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 RNF111Q6ZNA4 994 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 C6orf120Q7Z4R8 191 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 DHDDSQ86SQ9 333 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 ZNF615Q8N8J6 731 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 TMEM102Q8N9M5 508 aaPredicted RBP11.46□□□□□ -0.57
LINC00339-213ENST00000642137 APCDD1LQ8NCL9 501 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 OR52R1Q8NGF1 315 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 OR56A1Q8NGH5 318 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 OR8K3Q8NH51 312 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 ELP5Q8TE02 316 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 ZFP90Q8TF47 636 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 NCLNQ969V3 563 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 LRRC58Q96CX6 371 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 MAGED4Q96JG8 741 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 CGREF1Q99674 301 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 HOPXQ9BPY8 73 aaPredicted RBP11.46□□□□□ -0.57
LINC00339-213ENST00000642137 SLC35A5Q9BS91 424 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 NUDT9Q9BW91 350 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 EPS8L2Q9H6S3 715 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 ATP13A2Q9NQ11 1180 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 ZCCHC3Q9NUD5 404 aaKnown RBP11.46□□□□□ -0.57
LINC00339-213ENST00000642137 DDX18Q9NVP1 670 aaKnown RBP11.46□□□□□ -0.57
LINC00339-213ENST00000642137 VAPAQ9P0L0 249 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 COPS7AQ9UBW8 275 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 PRODH2Q9UF12 536 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 BCAP29Q9UHQ4 241 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 FBXL4Q9UKA2 621 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 POLHQ9Y253 713 aa11.46□□□□□ -0.57
LINC00339-213ENST00000642137 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 TTC36A6NLP5 189 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 TAF4O00268 1085 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 CLIC1O00299 241 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 PRAMEF2O60811 474 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 ATP5HO75947 161 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 PSMG1O95456 288 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 KRT16P08779 473 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 PPIBP23284 216 aaKnown RBP11.45□□□□□ -0.58
LINC00339-213ENST00000642137 MAGEA8P43361 318 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 EMDP50402 254 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 PRKAG1P54619 331 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 RRADP55042 308 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 TXNL4AP83876 142 aaKnown RBP11.45□□□□□ -0.58
LINC00339-213ENST00000642137 VAC14Q08AM6 782 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 CDC20Q12834 499 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 BNIP1Q12981 228 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 DUSP8Q13202 625 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 ATP1A4Q13733 1029 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 MYBPC3Q14896 1274 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 EXOSC7Q15024 291 aaKnown RBP11.45□□□□□ -0.58
LINC00339-213ENST00000642137 BTBD16Q32M84 506 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 TRMT5Q32P41 509 aaKnown RBP11.45□□□□□ -0.58
LINC00339-213ENST00000642137 SPDYE7PQ495Y7 208 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 SAXO2Q658L1 398 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 PROSER1Q86XN7 944 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 MSRB3Q8IXL7 192 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 ZNF321PQ8N8H1 164 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 KDF1Q8NAX2 398 aaPredicted RBP11.45□□□□□ -0.58
LINC00339-213ENST00000642137 SIMC1Q8NDZ2 872 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 HOXB13Q92826 284 aaPredicted RBP11.45□□□□□ -0.58
LINC00339-213ENST00000642137 NEURL3Q96EH8 262 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 GIMAP5Q96F15 307 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 ANKRD27Q96NW4 1050 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 SH3GL1Q99961 368 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 RAD21L1Q9H4I0 556 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 ANKRA2Q9H9E1 313 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 TPT1P8Q9HAU6 139 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 ZNF160Q9HCG1 818 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 SLC6A13Q9NSD5 602 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 GIN1Q9NXP7 522 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 SLC25A37Q9NYZ2 338 aa11.45□□□□□ -0.58
LINC00339-213ENST00000642137 A0A087WV48 116 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 RNF103-CHMP3A0A140T963 221 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 EVPLLA8MZ36 301 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 B2RBV5 119 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 ZFAND5O76080 213 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 UNC5CO95185 931 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 HMGN2P05204 90 aaKnown RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 SERPINA7P05543 415 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 MATN1P21941 496 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 SOAT1P35610 550 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 CHI3L1P36222 383 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 MAP3K8P41279 467 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 CPA2P48052 419 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 PRIM2P49643 509 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 NUDT2P50583 147 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 UCNP55089 124 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 SOX8P57073 446 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 DCAF7P61962 342 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 RNF4P78317 190 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 TLE3Q04726 772 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 AIMP2Q13155 320 aaKnown RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 GAB1Q13480 694 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 GTDC1Q4AE62 458 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 DCAF10Q5QP82 559 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 NANOGP8Q6NSW7 305 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 H3F3CQ6NXT2 135 aa11.44□□□□□ -0.58
LINC00339-213ENST00000642137 JMJD6Q6NYC1 403 aaPredicted RBP11.44□□□□□ -0.58
LINC00339-213ENST00000642137 C8orf82Q6P1X6 216 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms