RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 FGF13Q92913 245 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 PHOX2BQ99453 314 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 ANKHQ9HCJ1 492 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 TBC1D24Q9ULP9 559 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 GPC6Q9Y625 555 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-223ENST00000641597 A0A1W2PP55 124 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 FAAHO00519 579 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 CH25HO95992 272 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 CERS1P27544 350 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 MAT2AP31153 395 aaKnown RBP15.86■□□□□ 0.13
PHGDH-223ENST00000641597 CSTF2P33240 577 aaKnown RBP eCLIP15.86■□□□□ 0.13
PHGDH-223ENST00000641597 HYAL2Q12891 473 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 SLAMF1Q13291 335 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 TAB1Q15750 504 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 BAK1Q16611 211 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 GET4Q7L5D6 327 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-223ENST00000641597 SUN3Q8TAQ9 357 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 ITPKCQ96DU7 683 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 TRNT1Q96Q11 434 aaKnown RBP15.86■□□□□ 0.13
PHGDH-223ENST00000641597 FNDC11Q9BVV2 318 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 SP140LQ9H930 580 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 SMURF1Q9HCE7 757 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 CPNE5Q9HCH3 593 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 POLMQ9NP87 494 aaPredicted RBP15.86■□□□□ 0.13
PHGDH-223ENST00000641597 SLC35C2Q9NQQ7 365 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 MGAT4BQ9UQ53 548 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 PEX16Q9Y5Y5 336 aa15.86■□□□□ 0.13
PHGDH-223ENST00000641597 ARRDC5A6NEK1 342 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 A8MV72 311 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-223ENST00000641597 FHP07954 510 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 SOX6P35712 828 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 SNRPGP62308 76 aaKnown RBP15.85■□□□□ 0.13
PHGDH-223ENST00000641597 TEKQ02763 1124 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 IRF4Q15306 451 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 LTB4RQ15722 352 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 ATAT1Q5SQI0 421 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 AGBL4Q5VU57 503 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 ADAMTSL4Q6UY14 1074 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 NRARPQ7Z6K4 114 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 OR9Q1Q8NGQ5 310 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 C9orf43Q8TAL5 461 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-223ENST00000641597 ASB15Q8WXK1 588 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 DHRS1Q96LJ7 313 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 CEP19Q96LK0 163 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 ASB16Q96NS5 453 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 DDX31Q9H8H2 851 aaKnown RBP15.85■□□□□ 0.13
PHGDH-223ENST00000641597 PELI2Q9HAT8 420 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 TIGARQ9NQ88 270 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 P2RX2Q9UBL9 471 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 TSC22D4Q9Y3Q8 395 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 LAMA1P25391 3075 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 C2orf16Q68DN1 1984 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 CARNS1A5YM72 827 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 SAGE2PA6NJ88 616 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 GPAT3Q53EU6 434 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 MFSD4BQ5TF39 518 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 C22orf42Q6IC83 251 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 FAM109BQ6ICB4 259 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-223ENST00000641597 TANGO2Q6ICL3 276 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 VRK2Q86Y07 508 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 PHC2Q8IXK0 858 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 UBE2J2Q8N2K1 259 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 TMEM145Q8NBT3 493 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 OR52I1Q8NGK6 324 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 OR8D4Q8NGM9 314 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 TM9SF4Q92544 642 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 KAT2AQ92830 837 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 BBS4Q96RK4 519 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 ZNF607Q96SK3 696 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 TM9SF2Q99805 663 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 SLC30A2Q9BRI3 323 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 SLC6A20Q9NP91 592 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 ACAD8Q9UKU7 415 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 CFL2Q9Y281 166 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 GON4LQ3T8J9 2241 aa15.85■□□□□ 0.13
PHGDH-223ENST00000641597 ISPDA4D126 451 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 MPZL2O60487 215 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 HNRNPA1P09651 372 aaKnown RBP eCLIP15.84■□□□□ 0.13
PHGDH-223ENST00000641597 SSTR4P31391 388 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 GIPRP48546 466 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 MAN2A2P49641 1150 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 CLDN2P57739 230 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 INSL4Q14641 139 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 ZNF79Q15937 498 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 C2orf27AQ580R0 203 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 B3GLCTQ6Y288 498 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 USP30Q70CQ3 517 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 NANOGP1Q8N7R0 232 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 MORN4Q8NDC4 146 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 OR8J1Q8NGP2 316 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 SLC9A6Q92581 669 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 ARMC5Q96C12 935 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 CPSF4LA6NMK7 179 aaKnown RBP15.84■□□□□ 0.13
PHGDH-223ENST00000641597 MAN2B1O00754 1011 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 GSTT2P0CG29 244 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 GSTT2BP0CG30 244 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 PCYT1AP49585 367 aa15.84■□□□□ 0.13
PHGDH-223ENST00000641597 VASPP50552 380 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-223ENST00000641597 PRDX1Q06830 199 aaKnown RBP15.84■□□□□ 0.13
PHGDH-223ENST00000641597 TUBA3EQ6PEY2 450 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms