RNA–Protein interactions for RNA: ENST00000641476.1

SRRT-219, Transcript of serrate, RNA effector molecule, humanhuman

Gene SRRT, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-219ENST00000641476 RMND5BQ96G75 393 aaPredicted RBP13.4□□□□□ -0.26
SRRT-219ENST00000641476 SMR3AQ99954 134 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 RHOXF2Q9BQY4 288 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 OR10A5Q9H207 317 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 SLC24A3Q9HC58 644 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 AHSPQ9NZD4 102 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 Q9UFV3 132 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 SLC12A4Q9UP95 1085 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 DTX4Q9Y2E6 619 aa13.4□□□□□ -0.26
SRRT-219ENST00000641476 NINQ8N4C6 2090 aa13.4□□□□□ -0.27
SRRT-219ENST00000641476 A0A087WUV0 522 aaPredicted RBP13.39□□□□□ -0.27
SRRT-219ENST00000641476 EXOC1LA0A1B0GW35 172 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 CAPN14A8MX76 684 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 PPP6CO00743 305 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 TP53I11O14683 189 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 TRIM3O75382 744 aaPredicted RBP13.39□□□□□ -0.27
SRRT-219ENST00000641476 CTAG2O75638 210 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 PDYNP01213 254 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 GABRA1P14867 456 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 TSPAN8P19075 237 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 GPX3P22352 226 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 ZFP36L2P47974 494 aaKnown RBP13.39□□□□□ -0.27
SRRT-219ENST00000641476 TRPC1P48995 793 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 XKP51811 444 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 CDH13P55290 713 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 NNATQ16517 81 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 BIVMQ86UB2 503 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 ZZZ3Q8IYH5 903 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 PRR22Q8IZ63 422 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 VWA5B2Q8N398 1253 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 LIX1Q8N485 282 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 NEIL3Q8TAT5 605 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 SPPL2AQ8TCT8 520 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 SELENOMQ8WWX9 145 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 TP53INP1Q96A56 240 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 RILPQ96NA2 401 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 ALPK1Q96QP1 1244 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 HBEGFQ99075 208 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
SRRT-219ENST00000641476 REPIN1Q9BWE0 567 aaKnown RBP13.39□□□□□ -0.27
SRRT-219ENST00000641476 C1QTNF3Q9BXJ4 246 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 ACKR4Q9NPB9 350 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 TRPS1Q9UHF7 1281 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 PCDHA9Q9Y5H5 950 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 NPFFR2Q9Y5X5 522 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 ABCA4P78363 2273 aa13.39□□□□□ -0.27
SRRT-219ENST00000641476 C1orf226A1L170 272 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 ANKRD33BA6NCL7 494 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 ABHD2P08910 425 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 SNRPAP09012 282 aaKnown RBP13.38□□□□□ -0.27
SRRT-219ENST00000641476 FREM3P0C091 2139 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 PORP16435 677 aaPredicted RBP13.38□□□□□ -0.27
SRRT-219ENST00000641476 DGKQP52824 942 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 NRG3P56975 720 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 TCHHL1Q5QJ38 904 aaPredicted RBP13.38□□□□□ -0.27
SRRT-219ENST00000641476 RIPPLY2Q5TAB7 128 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 SLC48A1Q6P1K1 146 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 ULK2Q8IYT8 1036 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 TMEM151AQ8N4L1 468 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 C17orf47Q8NEP4 570 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 MYRIPQ8NFW9 859 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 OR7G1Q8NGA0 311 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 SECISBP2Q96T21 854 aaKnown RBP13.38□□□□□ -0.27
SRRT-219ENST00000641476 BRINP2Q9C0B6 783 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 NXF5Q9H1B4 397 aaKnown RBP13.38□□□□□ -0.27
SRRT-219ENST00000641476 CLEC4MQ9H2X3 399 aaPredicted RBP13.38□□□□□ -0.27
SRRT-219ENST00000641476 BRF2Q9HAW0 419 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 ALKBH4Q9NXW9 302 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 MAT2BQ9NZL9 334 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 ZNF225Q9UK10 706 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 CES1P1Q9UKY3 287 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 SNX6Q9UNH7 406 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 L3MBTL1Q9Y468 752 aa13.38□□□□□ -0.27
SRRT-219ENST00000641476 FLNAP21333 2647 aaKnown RBP13.38□□□□□ -0.27
SRRT-219ENST00000641476 C15orf38-AP3S2A0A0A6YYH1 394 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 GOLGA6L10A6NI86 522 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 FAM47E-STBD1D6RA91 191 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 GUCY1B2O75343 617 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 OR4F21O95013 312 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 ATP1B1P05026 303 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 S1PR1P21453 382 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 ABCD3P28288 659 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 GCAP28676 217 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 MASP1P48740 699 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 DUSP2Q05923 314 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 CRYZQ08257 329 aaKnown RBP13.37□□□□□ -0.27
SRRT-219ENST00000641476 DUSP8Q13202 625 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 SNTB1Q13884 538 aaKnown RBP13.37□□□□□ -0.27
SRRT-219ENST00000641476 PRICKLE4Q2TBC4 344 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 SLC25A35Q3KQZ1 300 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 ACSF3Q4G176 576 aaPredicted RBP13.37□□□□□ -0.27
SRRT-219ENST00000641476 FNDC7Q5VTL7 733 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 TMEM198Q66K66 360 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 WDR53Q7Z5U6 358 aaPredicted RBP13.37□□□□□ -0.27
SRRT-219ENST00000641476 LIX1LQ8IVB5 337 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 C1orf52Q8N6N3 182 aaKnown RBP13.37□□□□□ -0.27
SRRT-219ENST00000641476 TRPC4APQ8TEL6 797 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 KLHL29Q96CT2 875 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 TMEM237Q96Q45 408 aa13.37□□□□□ -0.27
SRRT-219ENST00000641476 MDFIQ99750 246 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms