RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 DEFB110Q30KQ9 67 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 EIPR1Q53HC9 387 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 HEPHL1Q6MZM0 1159 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 MFSD12Q6NUT3 480 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 ZC3H14Q6PJT7 736 aaKnown RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 C16orf62Q7Z3J2 963 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 FAM86B1Q8N7N1 296 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 TMEM105Q8N8V8 129 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 PIK3C3Q8NEB9 887 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 ZNF555Q8NEP9 628 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 OR9A4Q8NGU2 314 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 MAGEE2Q8TD90 523 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 TFAP2CQ92754 450 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 TAMM41Q96BW9 452 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 RBM18Q96H35 190 aaKnown RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 ART5Q96L15 291 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 DGAT2Q96PD7 388 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 OR7D2Q96RA2 312 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 ZNF300Q96RE9 604 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 CSF3RQ99062 836 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 SLC29A1Q99808 456 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 TREX2Q9BQ50 279 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 PSD2Q9BQI7 771 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 POLR2J2Q9GZM3 115 aaKnown RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 POLR2J3Q9H1A7 115 aaKnown RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 PIGUQ9H490 435 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 CUTCQ9NTM9 273 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 TMEM74BQ9NUR3 256 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 ZNF232Q9UNY5 417 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 SAMHD1Q9Y3Z3 626 aaKnown RBP9.12□□□□□ -0.95
PHGDH-215ENST00000641371 ENPP4Q9Y6X5 453 aa9.12□□□□□ -0.95
PHGDH-215ENST00000641371 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 A0A0A6YYC8 382 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 C7orf72A4D263 438 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 ZNF860A6NHJ4 632 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 TMEM150CB9EJG8 249 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 I3L1I5 382 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 FGF17O60258 216 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PRAMEF10O60809 474 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PRAMEF2O60811 474 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 UGT2B11O75310 529 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PRKRAO75569 313 aaKnown RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 GCM2O75603 506 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 OXSR1O95747 527 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 ALPPP05187 535 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 THBS1P07996 1170 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 SP9P0CG40 484 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 C8orf89P0DMQ9 161 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 CKMT1AP12532 417 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 ANXA8P13928 327 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 AQP1P29972 269 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PRKAR1BP31321 381 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 STT3AP46977 705 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 MAN2A2P49641 1150 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 HMGA2P52926 109 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 DAB2P98082 770 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 VLDLRP98155 873 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 SLC13A2Q13183 592 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 DSG2Q14126 1118 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 C16orf72Q14CZ0 275 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 LARS2Q15031 903 aaKnown RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PRICKLE4Q2TBC4 344 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 ARHGAP11BQ3KRB8 267 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 AMZ1Q400G9 498 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 SLC36A3Q495N2 470 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 GPAT3Q53EU6 434 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 TRIM61Q5EBN2 209 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 AP1ARQ63HQ0 302 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 DHRS4L2Q6PKH6 230 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 QSOX2Q6ZRP7 698 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 VTCN1Q7Z7D3 282 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 CARM1Q86X55 608 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 CHERPQ8IWX8 916 aaKnown RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 GALNT12Q8IXK2 581 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PEX5LQ8IYB4 626 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 VWA5B2Q8N398 1253 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 SETD9Q8NE22 299 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 CHDHQ8NE62 594 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 TOR1AIP2Q8NFQ8 470 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 OR7G1Q8NGA0 311 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 HOXB13Q92826 284 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 COL26A1Q96A83 441 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 ANKRD9Q96BM1 317 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 CTHRC1Q96CG8 243 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 MMABQ96EY8 250 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 GIMAP5Q96F15 307 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 COL21A1Q96P44 957 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PIP5K1AQ99755 562 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 LRRN3Q9H3W5 708 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 ZNF696Q9H7X3 374 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 MTHFD2LQ9H903 347 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 NDUFAF4Q9P032 175 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 KIF17Q9P2E2 1029 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PRODH2Q9UF12 536 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 MRPS2Q9Y399 296 aaKnown RBP9.11□□□□□ -0.95
PHGDH-215ENST00000641371 HSPE1-MOB4S4R3N1 261 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 PCDH15Q96QU1 1955 aa9.11□□□□□ -0.95
PHGDH-215ENST00000641371 DSPPQ9NZW4 1301 aa9.1□□□□□ -0.95
PHGDH-215ENST00000641371 A0A1B0GX78 115 aa9.1□□□□□ -0.95
PHGDH-215ENST00000641371 H3BMH7 237 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms