RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 GPAT3Q53EU6 434 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TMEM31Q5JXX7 168 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 FBXO42Q6P3S6 717 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 PODNL1Q6PEZ8 512 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TMEM92Q6UXU6 159 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ASPGQ86U10 573 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 IGFN1Q86VF2 1251 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 NRROSQ86YC3 692 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 NUP43Q8NFH3 380 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 OR6T1Q8NGN1 323 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 OR9A2Q8NGT5 310 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ABTB1Q969K4 478 aaPredicted RBP16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ELP4Q96EB1 424 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 POLR2J3Q9H1A7 115 aaKnown RBP16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ANKRA2Q9H9E1 313 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 NDOR1Q9UHB4 597 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 B3GNT3Q9Y2A9 372 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 PIAS3Q9Y6X2 628 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 A0A1W2PRQ8 180 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 A6NCN8 305 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 EFCAB10A6NFE3 127 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 AIREO43918 545 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 SLITRK5O94991 958 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 RASGRP1O95267 797 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ADRA2AP08913 450 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF12P17014 697 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 NDUFV2P19404 249 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 HNRNPA2B1P22626 353 aaKnown RBP16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TFF2Q03403 129 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 RGS1Q08116 209 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TARDBPQ13148 414 aaKnown RBP eCLIP16.06■□□□□ 0.16
PHGDH-211ENST00000641213 PRRT3Q5FWE3 981 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 SLX4IPQ5VYV7 408 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 SLC46A3Q7Z3Q1 461 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ADCK1Q86TW2 530 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TRIM73Q86UV7 250 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TMCO5AQ8N6Q1 288 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 NT5CQ8TCD5 201 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 SLC22A18Q96BI1 424 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ZHX1-C8orf76Q96EF9 292 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 CRELD1Q96HD1 420 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 OR7D2Q96RA2 312 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 IL4I1Q96RQ9 567 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 FNDC11Q9BVV2 318 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 C3orf14Q9HBI5 128 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 MAN2C1Q9NTJ4 1040 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 CNOT2Q9NZN8 540 aaKnown RBP16.06■□□□□ 0.16
PHGDH-211ENST00000641213 OSGIN1Q9UJX0 560 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 ZNF780BQ9Y6R6 833 aa16.06■□□□□ 0.16
PHGDH-211ENST00000641213 TPST2O60704 377 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 TP53P04637 393 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-211ENST00000641213 NR2F6P10588 404 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 DRD1P21728 446 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 GADD45AP24522 165 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 BUD31P41223 144 aaPredicted RBP16.05■□□□□ 0.16
PHGDH-211ENST00000641213 MAN2A2P49641 1150 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 TPMTP51580 245 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 XKP51811 444 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 SNRPGP62308 76 aaKnown RBP16.05■□□□□ 0.16
PHGDH-211ENST00000641213 MRPS21P82921 87 aaKnown RBP16.05■□□□□ 0.16
PHGDH-211ENST00000641213 KIR2DS3Q14952 304 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 FBXO43Q4G163 708 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 PRAMEF8Q5VWM4 474 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 PRAMEF7Q5VXH5 474 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 C10orf90Q96M02 699 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 OR2A14Q96R47 310 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 CDCA4Q9BXL8 241 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 PINK1Q9BXM7 581 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 QRSL1Q9H0R6 528 aaKnown RBP16.05■□□□□ 0.16
PHGDH-211ENST00000641213 HMG20AQ9NP66 347 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 EQTNQ9NQ60 294 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 FAIMQ9NVQ4 179 aa16.05■□□□□ 0.16
PHGDH-211ENST00000641213 H3BN98 237 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 TNFRSF10CO14798 259 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 CASC3O15234 703 aaKnown RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 NME6O75414 186 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 MAGP20916 626 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 SLC15A1P46059 708 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 CLK1P49759 484 aaKnown RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 LTB4RQ15722 352 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 C12orf73Q69YU5 71 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 BTLAQ7Z6A9 289 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 OR6Q1Q8NGQ2 317 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 KAT2AQ92830 837 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 TM4SF19Q96DZ7 209 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 SLIRPQ9GZT3 109 aaKnown RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 TWSG1Q9GZX9 223 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 SLC25A19Q9HC21 320 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 FBXO8Q9NRD0 319 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 CLDND1Q9NY35 253 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 TAS2R16Q9NYV7 291 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 ERGIC3Q9Y282 383 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 ENTPD6O75354 484 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 GRK5P34947 590 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 SRP54P61011 504 aaKnown RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 ITGADQ13349 1161 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 ARMCX4Q5H9R4 360 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 RPLP0P6Q8NHW5 317 aa16.04■□□□□ 0.16
PHGDH-211ENST00000641213 C9orf43Q8TAL5 461 aaPredicted RBP16.04■□□□□ 0.16
PHGDH-211ENST00000641213 S100ZQ8WXG8 99 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms