RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 DNAJC17Q9NVM6 304 aaKnown RBP3.14□□□□□ -1.91
CCDC7-216ENST00000640058 CIDEBQ9UHD4 219 aa3.14□□□□□ -1.91
CCDC7-216ENST00000640058 TEKT2Q9UIF3 430 aa3.14□□□□□ -1.91
CCDC7-216ENST00000640058 KCNK6Q9Y257 313 aa3.14□□□□□ -1.91
CCDC7-216ENST00000640058 AFF2P51816 1311 aa3.14□□□□□ -1.91
CCDC7-216ENST00000640058 TNRQ92752 1358 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 PANO1I0J062 215 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 SLC33A1O00400 549 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-216ENST00000640058 FMO6PO60774 539 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 OAS1P00973 400 aaKnown RBP3.13□□□□□ -1.91
CCDC7-216ENST00000640058 CT45A8P0DMV1 189 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 CT45A9P0DMV2 189 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 ZNF17P17021 662 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 PTPN4P29074 926 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 SERPINB6P35237 376 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 ZNF674Q2M3X9 581 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 CT45A2Q5DJT8 189 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 GLRA4Q5JXX5 417 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 TCHHL1Q5QJ38 904 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-216ENST00000640058 TAF3Q5VWG9 929 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 RHBDD2Q6NTF9 364 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 TGIF2LYQ8IUE0 185 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 TMEM126BQ8IUX1 230 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 GPR65Q8IYL9 337 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 LINC00518Q8N0U6 118 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 UBTD2Q8WUN7 234 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 SLCO4A1Q96BD0 722 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 C16orf74Q96GX8 76 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 IMMP1LQ96LU5 166 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 TECTBQ96PL2 329 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 UTP14AQ9BVJ6 771 aaKnown RBP3.13□□□□□ -1.91
CCDC7-216ENST00000640058 HES7Q9BYE0 225 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 PNPLA3Q9NST1 481 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 ABCB8Q9NUT2 735 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 CNIH4Q9P003 139 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 ATG4BQ9Y4P1 393 aa3.13□□□□□ -1.91
CCDC7-216ENST00000640058 FAM149AA5PLN7 773 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 YJEFN3A6XGL0 299 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 G3V3Y1 287 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 ZNF861PO60384 105 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 HSPB1P04792 205 aaKnown RBP3.12□□□□□ -1.91
CCDC7-216ENST00000640058 FCER2P06734 321 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 WNT2P09544 360 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 ALPIP09923 528 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 XCR1P46094 333 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 ZNF33BQ06732 778 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 IQCA1Q86XH1 822 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 SYCP3Q8IZU3 236 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 C14orf178Q8N769 122 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-216ENST00000640058 CCDC26Q8TAB7 109 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 SETD7Q8WTS6 366 aaKnown RBP3.12□□□□□ -1.91
CCDC7-216ENST00000640058 HAS2Q92819 552 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 TRIM9Q9C026 710 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 NMUR2Q9GZQ4 415 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 SLC26A1Q9H2B4 701 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 IL1RAPL2Q9NP60 686 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 MYOZ2Q9NPC6 264 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 KIF7Q2M1P5 1343 aa3.12□□□□□ -1.91
CCDC7-216ENST00000640058 FGD5Q6ZNL6 1462 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 PDXKO00764 312 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 GMNNO75496 209 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 SLC2A10O95528 541 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 TXNDC12O95881 172 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 VDRP11473 427 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 SNU13P55769 128 aaKnown RBP3.11□□□□□ -1.91
CCDC7-216ENST00000640058 ST8SIA6P61647 398 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 RPS4XP62701 263 aaKnown RBP3.11□□□□□ -1.91
CCDC7-216ENST00000640058 KLF5Q13887 457 aaPredicted RBP3.11□□□□□ -1.91
CCDC7-216ENST00000640058 MORF4L2Q15014 288 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 KBTBD12Q3ZCT8 623 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 RTL6Q6ICC9 239 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 IYDQ6PHW0 289 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 GPR142Q7Z601 462 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 CCDC170Q8IYT3 715 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 OR6M1Q8NGM8 313 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 RFESDQ8TAC1 157 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 RNF138Q8WVD3 245 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 SPAG8Q99932 426 aaPredicted RBP3.11□□□□□ -1.91
CCDC7-216ENST00000640058 FAM173AQ9BQD7 235 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 FUNDC2Q9BWH2 189 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 GPR174Q9BXC1 333 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 CACNG6Q9BXT2 260 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 NAPBQ9H115 298 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 RSPH9Q9H1X1 276 aaPredicted RBP3.11□□□□□ -1.91
CCDC7-216ENST00000640058 ESM1Q9NQ30 184 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 SLC2A6Q9UGQ3 507 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 APOBEC3BQ9UH17 382 aaKnown RBP3.11□□□□□ -1.91
CCDC7-216ENST00000640058 EMCNQ9ULC0 261 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 CCPG1Q9ULG6 757 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 DIMT1Q9UNQ2 313 aaKnown RBP3.11□□□□□ -1.91
CCDC7-216ENST00000640058 SLC9A8Q9Y2E8 581 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 RNF115Q9Y4L5 304 aa3.11□□□□□ -1.91
CCDC7-216ENST00000640058 IGLV8-61A0A075B6I0 122 aa3.1□□□□□ -1.91
CCDC7-216ENST00000640058 A0A0A6YYD4 124 aa3.1□□□□□ -1.91
CCDC7-216ENST00000640058 NUDT21O43809 227 aaKnown RBP3.1□□□□□ -1.91
CCDC7-216ENST00000640058 GOSR1O95249 250 aa3.1□□□□□ -1.91
CCDC7-216ENST00000640058 IGLV1-47P01700 117 aa3.1□□□□□ -1.91
CCDC7-216ENST00000640058 ZNF853P0CG23 659 aa3.1□□□□□ -1.91
CCDC7-216ENST00000640058 CCDC166P0CW27 439 aa3.1□□□□□ -1.91
CCDC7-216ENST00000640058 ACP1P24666 158 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms