RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 PRSS53Q2L4Q9 553 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 DNAL1Q4LDG9 190 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 TMEM35AQ53FP2 167 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 PIGGQ5H8A4 983 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 PAGE2BQ5JRK9 111 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 TCHHL1Q5QJ38 904 aaPredicted RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 SH2D4BQ5SQS7 431 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 ZNF678Q5SXM1 525 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 LIPJQ5W064 366 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 DESI1Q6ICB0 168 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 RTL6Q6ICC9 239 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 IL20RBQ6UXL0 311 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 CYP4Z2PQ8N1L4 340 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 ZCCHC7Q8N3Z6 543 aaKnown RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 PTGR2Q8N8N7 351 aaPredicted RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 ZNF441Q8N8Z8 693 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 MORN4Q8NDC4 146 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 PSD4Q8NDX1 1056 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 OR2M7Q8NG81 312 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 MCUR1Q96AQ8 359 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 CMTM5Q96DZ9 223 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 PHF21BQ96EK2 531 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 TREX2Q9BQ50 279 aaPredicted RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 OR8D2Q9GZM6 311 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 C1orf21Q9H246 121 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 GSTO2Q9H4Y5 243 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 NOL11Q9H8H0 719 aaKnown RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 IPPKQ9H8X2 491 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 ARMCX1Q9P291 453 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 TNFRSF10DQ9UBN6 386 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 ZDHHC2Q9UIJ5 367 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 CES1P1Q9UKY3 287 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 STK38LQ9Y2H1 464 aa7.24□□□□□ -1.25
PNKP-229ENST00000637897 YARS2Q9Y2Z4 477 aaKnown RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 ZNF469Q96JG9 3925 aaPredicted RBP7.24□□□□□ -1.25
PNKP-229ENST00000637897 EXPH5Q8NEV8 1989 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 LRRC3CA6NJW4 275 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 B2RBV5 119 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 B4DXG7 233 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 STX16-NPEPL1H3BU86 382 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 CLDN4O14493 209 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 STX16O14662 325 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 SUPT7LO94864 414 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 ATP6V1G2O95670 118 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 IFNA16P05015 189 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 SNRPB2P08579 225 aaKnown RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 FGF4P08620 206 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 GFAPP14136 432 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 IGFBP2P18065 325 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 CPN2P22792 545 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 PIGAP37287 484 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 SSR2P43308 183 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 DNASE1L1P49184 302 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 SSR4P51571 173 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 CDH13P55290 713 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 PER3P56645 1201 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 SLC37A1P57057 533 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 IRX1P78414 480 aaPredicted RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 TBL3Q12788 808 aaKnown RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 SLC9B1Q4ZJI4 515 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 UNC50Q53HI1 259 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 FNDC7Q5VTL7 733 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 LETMD1Q6P1Q0 360 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 TMEM64Q6YI46 380 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 HSDL2Q6YN16 418 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 GPR180Q86V85 440 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 PACS2Q86VP3 889 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 TREML1Q86YW5 311 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 MCEMP1Q8IX19 187 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 GHDCQ8N2G8 530 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 TMEM132CQ8N3T6 1108 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 TMEM156Q8N614 296 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 TMEM251Q8N6I4 163 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 OR4F6Q8NGB9 312 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 OR8K3Q8NH51 312 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 OR14A16Q8NHC5 309 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 CEP70Q8NHQ1 597 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 FAM57AQ8TBR7 257 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 AGR3Q8TD06 166 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 ACTRT2Q8TDY3 377 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 ZNF483Q8TF39 744 aaPredicted RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 MTFMTQ96DP5 389 aaKnown RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 CMTM7Q96FZ5 175 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 NTMT1Q9BV86 223 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 C1QTNF3Q9BXJ4 246 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 TTTY12Q9BZ98 90 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 NUF2Q9BZD4 464 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 DEFB127Q9H1M4 99 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 RPF2Q9H7B2 306 aaKnown RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 MEAF6Q9HAF1 191 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 PFDN4Q9NQP4 134 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 NPDC1Q9NQX5 325 aaPredicted RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 TUBA8Q9NY65 449 aaPredicted RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 TAS2R1Q9NYW7 299 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 PPT2Q9UMR5 302 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 DTX4Q9Y2E6 619 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 KLF13Q9Y2Y9 288 aaPredicted RBP7.23□□□□□ -1.25
PNKP-229ENST00000637897 FAM215AQ9Y5M1 114 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 TACC2O95359 2948 aa7.23□□□□□ -1.25
PNKP-229ENST00000637897 F8P00451 2351 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms