RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 OR2L13Q8N349 312 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 B3GNT7Q8NFL0 401 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 OR56A1Q8NGH5 318 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CLHC1Q8NHS4 586 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CDC26Q8NHZ8 85 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SUN3Q8TAQ9 357 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 OIT3Q8WWZ8 545 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 EXOSC8Q96B26 276 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ROPN1LQ96C74 230 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SPDL1Q96EA4 605 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 VMP1Q96GC9 406 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ITCHQ96J02 903 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 AMDHD1Q96NU7 426 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CCDC106Q9BWC9 280 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ALOXE3Q9BYJ1 711 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SEMA4CQ9C0C4 833 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 RAD21L1Q9H4I0 556 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SOX17Q9H6I2 414 aaPredicted RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 NECTIN3Q9NQS3 549 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 THUMPD1Q9NXG2 353 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 GIN1Q9NXP7 522 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CCDC167Q9P0B6 97 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 SH3BP4Q9P0V3 963 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 PRODH2Q9UF12 536 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 BAIAP2L1Q9UHR4 511 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF639Q9UID6 485 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 G3BP2Q9UN86 482 aaKnown RBP6.27□□□□□ -1.41
UPF3B-205ENST00000636792 RAXQ9Y2V3 346 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 NDUFAF1Q9Y375 327 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 HS3ST3B1Q9Y662 390 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 CLCA3PQ9Y6N3 262 aa6.27□□□□□ -1.41
UPF3B-205ENST00000636792 DCHS1Q96JQ0 3298 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 EXPH5Q8NEV8 1989 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 A0A096LPI6 279 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 DUXAA6NLW8 204 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 CAPN14A8MX76 684 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 F8W735 103 aaPredicted RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 AGRPO00253 132 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 SOCS6O14544 535 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 RFXANKO14593 260 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 KLK10O43240 276 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 AKAP10O43572 662 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 ASNA1O43681 348 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 DNAJA2O60884 412 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 B4GALT2O60909 372 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 LDB3O75112 727 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 JRKO75564 520 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 CDC123O75794 336 aaPredicted RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 KCNH1O95259 989 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 PSMG1O95456 288 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 AK1P00568 194 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 IGKV3-11P04433 115 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 IFNA16P05015 189 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 LAMP1P11279 417 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 COX6A1P12074 109 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 SPINK2P20155 84 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 UQCRC2P22695 453 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 LCN1P31025 176 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 ZFP36L2P47974 494 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 PRIM2P49643 509 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 TMED10P49755 219 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 CLCN2P51788 898 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 NCBP2P52298 156 aaKnown RBP eCLIP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 MANFP55145 182 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 SLC26A5P58743 744 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 CHAF1BQ13112 559 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 AIMP2Q13155 320 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 FADDQ13158 208 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 CYLC2Q14093 348 aaPredicted RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 KRT72Q14CN4 511 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 PCOLCEQ15113 449 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 TRMT5Q32P41 509 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 SPATS1Q496A3 300 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 TIGD2Q4W5G0 525 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 AGKQ53H12 422 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF385BQ569K4 471 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 SFT2D3Q587I9 215 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 ZNF628Q5EBL2 1059 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 PAPD4Q6PIY7 484 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 PAOXQ6QHF9 649 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 NDUFAF7Q7L592 441 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 PPP1R32Q7Z5V6 425 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 MTDHQ86UE4 582 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 FUNDC1Q8IVP5 155 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 APLFQ8IW19 511 aaPredicted RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 TMEM151BQ8IW70 566 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 CLEC1AQ8NC01 280 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 TMEM52Q8NDY8 209 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 OR7A2PQ8NGA2 310 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 OR11G2Q8NGC1 345 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 OR5L2Q8NGL0 311 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 OR1N1Q8NGS0 311 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 NUBPLQ8TB37 319 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 MIPOL1Q8TD10 442 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 ZCCHC14Q8WYQ9 949 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 HOXB13Q92826 284 aaPredicted RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 RIT1Q92963 219 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 THOC1Q96FV9 657 aaKnown RBP6.26□□□□□ -1.41
UPF3B-205ENST00000636792 MARK4Q96L34 752 aa6.26□□□□□ -1.41
UPF3B-205ENST00000636792 IMMP1LQ96LU5 166 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms